17 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103042559	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
	ENSAMXP00000043951	Integrin beta. (210 aa)
	ENSAMXP00000053345	MH1 domain-containing protein. (187 aa)
	lef1	Lymphoid enhancer-binding factor 1. (384 aa)
	itgb8	Integrin beta; Belongs to the integrin beta chain family. (790 aa)
	LOC103022398	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (361 aa)
	LOC103032011	Leucine rich repeat containing 32. (680 aa)
	TBX10	T-box transcription factor 10. (196 aa)
	LOC103034045	Uncharacterized protein. (645 aa)
	W5LD66_ASTMX	Mothers against decapentaplegic homolog. (573 aa)
	LOC103022359	Mothers against decapentaplegic homolog. (587 aa)
	LOC103029394	Mothers against decapentaplegic homolog. (544 aa)
	tgfbr2	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
	W5LMI9_ASTMX	T-box transcription factor 1. (417 aa)
	ENSAMXP00000028486	Mothers against decapentaplegic homolog. (493 aa)
	ENSAMXP00000029017	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (203 aa)
	ENSAMXP00000042051	Integrin beta; Belongs to the integrin beta chain family. (503 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000028486	LOC103042559	ENSAMXP00000028486	ENSAMXP00000043824	Mothers against decapentaplegic homolog.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.603
ENSAMXP00000028486	lef1	ENSAMXP00000028486	ENSAMXP00000044691	Mothers against decapentaplegic homolog.	Lymphoid enhancer-binding factor 1.	0.470
ENSAMXP00000028486	tgfbr2	ENSAMXP00000028486	ENSAMXP00000021003	Mothers against decapentaplegic homolog.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.603
ENSAMXP00000029017	LOC103022398	ENSAMXP00000029017	ENSAMXP00000007825	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.905
ENSAMXP00000029017	lef1	ENSAMXP00000029017	ENSAMXP00000044691	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Lymphoid enhancer-binding factor 1.	0.414
ENSAMXP00000042051	ENSAMXP00000043951	ENSAMXP00000042051	ENSAMXP00000043951	Integrin beta; Belongs to the integrin beta chain family.	Integrin beta.	0.502
ENSAMXP00000042051	itgb8	ENSAMXP00000042051	ENSAMXP00000004815	Integrin beta; Belongs to the integrin beta chain family.	Integrin beta; Belongs to the integrin beta chain family.	0.716
ENSAMXP00000043951	ENSAMXP00000042051	ENSAMXP00000043951	ENSAMXP00000042051	Integrin beta.	Integrin beta; Belongs to the integrin beta chain family.	0.502
ENSAMXP00000043951	itgb8	ENSAMXP00000043951	ENSAMXP00000004815	Integrin beta.	Integrin beta; Belongs to the integrin beta chain family.	0.701
ENSAMXP00000053345	LOC103042559	ENSAMXP00000053345	ENSAMXP00000043824	MH1 domain-containing protein.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.603
ENSAMXP00000053345	lef1	ENSAMXP00000053345	ENSAMXP00000044691	MH1 domain-containing protein.	Lymphoid enhancer-binding factor 1.	0.470
ENSAMXP00000053345	tgfbr2	ENSAMXP00000053345	ENSAMXP00000021003	MH1 domain-containing protein.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.603
LOC103022359	LOC103029394	ENSAMXP00000018891	ENSAMXP00000019787	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103022359	LOC103042559	ENSAMXP00000018891	ENSAMXP00000043824	Mothers against decapentaplegic homolog.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.603
LOC103022359	W5LD66_ASTMX	ENSAMXP00000018891	ENSAMXP00000017778	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103022359	lef1	ENSAMXP00000018891	ENSAMXP00000044691	Mothers against decapentaplegic homolog.	Lymphoid enhancer-binding factor 1.	0.944
LOC103022359	tgfbr2	ENSAMXP00000018891	ENSAMXP00000021003	Mothers against decapentaplegic homolog.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.603
LOC103022398	ENSAMXP00000029017	ENSAMXP00000007825	ENSAMXP00000029017	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.905
LOC103022398	lef1	ENSAMXP00000007825	ENSAMXP00000044691	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Lymphoid enhancer-binding factor 1.	0.414
LOC103029394	LOC103022359	ENSAMXP00000019787	ENSAMXP00000018891	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901