STRINGSTRING
six3 six3 W5KUF8_ASTMX W5KUF8_ASTMX LOC103038426 LOC103038426 LOC103024543 LOC103024543 LOC103046695 LOC103046695 LOC103035477 LOC103035477 LOC103027456 LOC103027456 LOC111191903 LOC111191903 LOC103047033 LOC103047033 fzr1 fzr1 celf1 celf1 atf4 atf4 LOC103029147 LOC103029147 dlx3 dlx3 skil skil LOC103042280 LOC103042280 BFSP1 BFSP1 LOC103023682 LOC103023682 nf2 nf2 LOC103035166 LOC103035166 tgfb1 tgfb1 tdrd7 tdrd7 LOC103027845 LOC103027845 LOC103024607 LOC103024607
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
six3SIX homeobox 3a. (294 aa)
W5KUF8_ASTMXTudor domain containing 7 b. (1092 aa)
LOC103038426SIX homeobox 7. (258 aa)
LOC103024543Fizzy/cell division cycle 20 related 1b. (483 aa)
LOC103046695Neurofibromin 2b (merlin). (587 aa)
LOC103035477SIX homeobox 6b. (242 aa)
LOC103027456Homeobox protein. (293 aa)
LOC111191903Zgc:63863. (408 aa)
LOC103047033WD_REPEATS_REGION domain-containing protein. (487 aa)
fzr1Fizzy/cell division cycle 20 related 1a. (495 aa)
celf1Cugbp, Elav-like family member 1. (581 aa)
atf4Activating transcription factor 4a. (398 aa)
LOC103029147Distal-less homeobox 4b. (231 aa)
dlx3Distal-less homeobox 3b. (265 aa)
skilSKI-like proto-oncogene a. (681 aa)
LOC103042280TBC1 domain family, member 20. (403 aa)
BFSP1Beaded filament structural protein 1; Belongs to the intermediate filament family. (670 aa)
LOC103023682SIX homeobox 6a. (240 aa)
nf2Neurofibromin 2a (merlin). (591 aa)
LOC103035166SIX homeobox 3b. (289 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
tdrd7Tudor domain containing 7 a. (1075 aa)
LOC103027845SKI-like proto-oncogene b. (715 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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