STRINGSTRING
serpinf2 serpinf2 W5KDT9_ASTMX W5KDT9_ASTMX itgb8 itgb8 LOC103032011 LOC103032011 LOC103034045 LOC103034045 W5LD66_ASTMX W5LD66_ASTMX LOC103022359 LOC103022359 LOC103029394 LOC103029394 LOC103046319 LOC103046319 tyrobp tyrobp ENSAMXP00000028486 ENSAMXP00000028486 hsp90ab1 hsp90ab1 LOC103038582 LOC103038582 ENSAMXP00000042051 ENSAMXP00000042051 ENSAMXP00000043951 ENSAMXP00000043951 LOC103047128 LOC103047128 LAPTM4B LAPTM4B LOC103042476 LOC103042476 ENSAMXP00000053345 ENSAMXP00000053345
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
serpinf2SERPIN domain-containing protein; Belongs to the serpin family. (470 aa)
W5KDT9_ASTMXFibronectin 1a. (2159 aa)
itgb8Integrin beta; Belongs to the integrin beta chain family. (790 aa)
LOC103032011Leucine rich repeat containing 32. (680 aa)
LOC103034045Uncharacterized protein. (645 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
LOC103046319SERPIN domain-containing protein; Belongs to the serpin family. (459 aa)
tyrobpUncharacterized protein. (130 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
hsp90ab1Heat shock protein 90, alpha (cytosolic), class B member 1. (725 aa)
LOC103038582Si:ch211-286o17.1. (326 aa)
ENSAMXP00000042051Integrin beta; Belongs to the integrin beta chain family. (503 aa)
ENSAMXP00000043951Integrin beta. (210 aa)
LOC103047128Lumican. (341 aa)
LAPTM4BUncharacterized protein. (236 aa)
LOC103042476Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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