STRINGSTRING
Mdm1 Mdm1 LOC103042343 LOC103042343 LOC103036398 LOC103036398 LOC103026885 LOC103026885 Cep97 Cep97 tmem39a tmem39a W5LD66_ASTMX W5LD66_ASTMX Lrrk2 Lrrk2 LOC103022359 LOC103022359 LOC103029394 LOC103029394 W5LMB0_ASTMX W5LMB0_ASTMX tmem39b tmem39b W5LRK4_ASTMX W5LRK4_ASTMX ENSAMXP00000028415 ENSAMXP00000028415 ENSAMXP00000028486 ENSAMXP00000028486 LOC103030202 LOC103030202 LOC103035587 LOC103035587 fez1 fez1 LOC103034726 LOC103034726 ENSAMXP00000037701 ENSAMXP00000037701 ENSAMXP00000038669 ENSAMXP00000038669 pink1 pink1 tbc1d30 tbc1d30 ENSAMXP00000044711 ENSAMXP00000044711 styxl1 styxl1 ENSAMXP00000049079 ENSAMXP00000049079 phf23 phf23 tesk2 tesk2 ENSAMXP00000053345 ENSAMXP00000053345
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Mdm1Mdm1 nuclear protein. (663 aa)
LOC103042343Smith-Magenis syndrome chromosome region, candidate 8b. (993 aa)
LOC103036398Si:dkeyp-75h12.2. (711 aa)
LOC103026885Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (796 aa)
Cep97Centrosomal protein 97. (568 aa)
tmem39aTransmembrane protein 39A. (483 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
Lrrk2Leucine-rich repeat kinase 2. (2537 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
W5LMB0_ASTMXSi:dkey-288i20.2. (396 aa)
tmem39bTransmembrane protein 39B. (492 aa)
W5LRK4_ASTMXNuclear protein 1a. (76 aa)
ENSAMXP00000028415Si:ch211-57i17.1. (453 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
LOC103030202Uncharacterized protein. (733 aa)
LOC103035587Microtubule-associated protein. (914 aa)
fez1Fasciculation and elongation protein zeta 1 (zygin I). (413 aa)
LOC103034726Microtubule-associated protein. (1393 aa)
ENSAMXP00000037701RING-type domain-containing protein. (132 aa)
ENSAMXP00000038669Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family. (568 aa)
pink1PTEN induced kinase 1. (571 aa)
tbc1d30TBC1 domain family, member 30. (855 aa)
ENSAMXP00000044711Uncharacterized protein. (126 aa)
styxl1Serine/threonine/tyrosine interacting-like 1. (293 aa)
ENSAMXP00000049079RNA binding motif protein 4.3. (240 aa)
phf23PHD finger protein 23b. (319 aa)
tesk2Testis associated actin remodelling kinase 2. (691 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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