10 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAMXP00000053345	MH1 domain-containing protein. (187 aa)
	Pwwp2b	PWWP domain containing 2B. (582 aa)
	znf451	Zinc finger protein 451. (923 aa)
	W5LD66_ASTMX	Mothers against decapentaplegic homolog. (573 aa)
	LOC103022359	Mothers against decapentaplegic homolog. (587 aa)
	LOC103029394	Mothers against decapentaplegic homolog. (544 aa)
	ENSAMXP00000028486	Mothers against decapentaplegic homolog. (493 aa)
	chek1	Checkpoint kinase 1; Belongs to the protein kinase superfamily. (464 aa)
	brca1	Uncharacterized protein. (1579 aa)
	pwwp2a	PWWP domain containing 2A. (1023 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103022359	LOC103029394	ENSAMXP00000018891	ENSAMXP00000019787	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103022359	W5LD66_ASTMX	ENSAMXP00000018891	ENSAMXP00000017778	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103029394	LOC103022359	ENSAMXP00000019787	ENSAMXP00000018891	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103029394	W5LD66_ASTMX	ENSAMXP00000019787	ENSAMXP00000017778	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
W5LD66_ASTMX	LOC103022359	ENSAMXP00000017778	ENSAMXP00000018891	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
W5LD66_ASTMX	LOC103029394	ENSAMXP00000017778	ENSAMXP00000019787	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
brca1	chek1	ENSAMXP00000045479	ENSAMXP00000031559	Uncharacterized protein.	Checkpoint kinase 1; Belongs to the protein kinase superfamily.	0.899
brca1	pwwp2a	ENSAMXP00000045479	ENSAMXP00000047737	Uncharacterized protein.	PWWP domain containing 2A.	0.763
chek1	brca1	ENSAMXP00000031559	ENSAMXP00000045479	Checkpoint kinase 1; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.899
chek1	pwwp2a	ENSAMXP00000031559	ENSAMXP00000047737	Checkpoint kinase 1; Belongs to the protein kinase superfamily.	PWWP domain containing 2A.	0.788
pwwp2a	brca1	ENSAMXP00000047737	ENSAMXP00000045479	PWWP domain containing 2A.	Uncharacterized protein.	0.763
pwwp2a	chek1	ENSAMXP00000047737	ENSAMXP00000031559	PWWP domain containing 2A.	Checkpoint kinase 1; Belongs to the protein kinase superfamily.	0.788