(32 nodes) Ionotropic glutamate receptor, metazoa network (Astyanax mexicanus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W5K1B7_ASTMX	Glutamate receptor, ionotropic, kainate 4. (759 aa)
	Grin2a	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1294 aa)
	LOC103035012	Glutamate receptor, ionotropic, AMPA 4b. (904 aa)
	W5K8B4_ASTMX	Glutamate receptor, ionotropic, AMPA 4a. (870 aa)
	LOC103044887	Uncharacterized protein. (910 aa)
	LOC103044872	Glutamate receptor, ionotropic, AMPA 3a. (887 aa)
	LOC103040794	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a. (1810 aa)
	W5L1V4_ASTMX	Glutamate receptor, ionotropic, delta 1a. (795 aa)
	W5L4B3_ASTMX	Glutamate receptor, ionotropic, AMPA 3b. (821 aa)
	LOC103035003	Si:ch211-251b21.1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (467 aa)
	W5L4R2_ASTMX	Si:ch211-264f5.8. (1006 aa)
	Grid2	Glutamate receptor, ionotropic, delta 2. (946 aa)
	W5L9F6_ASTMX	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1786 aa)
	W5L9Q1_ASTMX	Glutamate receptor, ionotropic, N-methyl D-aspartate 1b. (939 aa)
	W5LHC5_ASTMX	Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b. (1511 aa)
	Grin3b	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1042 aa)
	grik5	Glutamate receptor, ionotropic, kainate 5. (1046 aa)
	LOC103047032	Si:dkey-183j2.10; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (467 aa)
	GRID1	Glutamate receptor, ionotropic, delta 1b. (928 aa)
	LOC103021580	Glutamate receptor, ionotropic, kainate 1b. (863 aa)
	LOC103038234	Glutamate receptor, ionotropic, kainate 1a. (918 aa)
	ENSAMXP00000046482	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b. (1415 aa)
	ENSAMXP00000046873	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a. (962 aa)
	GRIA2	Glutamate ionotropic receptor AMPA type subunit 2. (883 aa)
	LOC103025257	Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca. (1424 aa)
	LOC103046826	Glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb. (1334 aa)
	GRIK2	Glutamate ionotropic receptor kainate type subunit 2. (951 aa)
	GRIK3	Glutamate ionotropic receptor kainate type subunit 3. (920 aa)
	GRIN3A	Glutamate ionotropic receptor NMDA type subunit 3A. (1144 aa)
	LOC103028119	Glutamate receptor, ionotropic, AMPA 2a. (902 aa)
	ENSAMXP00000054879	PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (244 aa)
	Grin2b	Uncharacterized protein. (1548 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000046482	ENSAMXP00000046873	ENSAMXP00000046482	ENSAMXP00000046873	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	0.817
ENSAMXP00000046482	GRIN3A	ENSAMXP00000046482	ENSAMXP00000051955	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.	Glutamate ionotropic receptor NMDA type subunit 3A.	0.610
ENSAMXP00000046482	Grin2b	ENSAMXP00000046482	ENSAMXP00000054899	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.	Uncharacterized protein.	0.578
ENSAMXP00000046482	Grin3b	ENSAMXP00000046482	ENSAMXP00000019358	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.515
ENSAMXP00000046482	LOC103046826	ENSAMXP00000046482	ENSAMXP00000048963	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb.	0.413
ENSAMXP00000046482	W5L9Q1_ASTMX	ENSAMXP00000046482	ENSAMXP00000016563	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.	Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.	0.817
ENSAMXP00000046482	W5LHC5_ASTMX	ENSAMXP00000046482	ENSAMXP00000019237	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b.	0.578
ENSAMXP00000046873	ENSAMXP00000046482	ENSAMXP00000046873	ENSAMXP00000046482	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.	0.817
ENSAMXP00000046873	GRIA2	ENSAMXP00000046873	ENSAMXP00000046916	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate ionotropic receptor AMPA type subunit 2.	0.426
ENSAMXP00000046873	GRIN3A	ENSAMXP00000046873	ENSAMXP00000051955	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate ionotropic receptor NMDA type subunit 3A.	0.914
ENSAMXP00000046873	Grin2a	ENSAMXP00000046873	ENSAMXP00000002588	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.817
ENSAMXP00000046873	Grin2b	ENSAMXP00000046873	ENSAMXP00000054899	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Uncharacterized protein.	0.817
ENSAMXP00000046873	Grin3b	ENSAMXP00000046873	ENSAMXP00000019358	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.857
ENSAMXP00000046873	LOC103025257	ENSAMXP00000046873	ENSAMXP00000047117	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca.	0.806
ENSAMXP00000046873	LOC103028119	ENSAMXP00000046873	ENSAMXP00000054561	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, AMPA 2a.	0.426
ENSAMXP00000046873	LOC103035012	ENSAMXP00000046873	ENSAMXP00000003036	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, AMPA 4b.	0.413
ENSAMXP00000046873	LOC103040794	ENSAMXP00000046873	ENSAMXP00000009666	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a.	0.817
ENSAMXP00000046873	LOC103044872	ENSAMXP00000046873	ENSAMXP00000007768	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, AMPA 3a.	0.413
ENSAMXP00000046873	LOC103046826	ENSAMXP00000046873	ENSAMXP00000048963	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb.	0.806
ENSAMXP00000046873	W5K8B4_ASTMX	ENSAMXP00000046873	ENSAMXP00000003825	Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.	Glutamate receptor, ionotropic, AMPA 4a.	0.413