(6 nodes) Ataxin, AXH domain network (Astyanax mexicanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAMXP00000045999	Ataxin 1a. (761 aa)
	hbp1	HMG-box transcription factor 1. (514 aa)
	LOC103029611	Ataxin 1b. (855 aa)
	LOC111195425	AXH domain-containing protein. (512 aa)
	atxn1l	Ataxin 1-like. (870 aa)
	LOC103038298	AXH domain-containing protein. (603 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000045999	hbp1	ENSAMXP00000045999	ENSAMXP00000052618	Ataxin 1a.	HMG-box transcription factor 1.	0.406
LOC103029611	hbp1	ENSAMXP00000036655	ENSAMXP00000052618	Ataxin 1b.	HMG-box transcription factor 1.	0.406
LOC103038298	hbp1	ENSAMXP00000002788	ENSAMXP00000052618	AXH domain-containing protein.	HMG-box transcription factor 1.	0.406
LOC111195425	hbp1	ENSAMXP00000038441	ENSAMXP00000052618	AXH domain-containing protein.	HMG-box transcription factor 1.	0.406
atxn1l	hbp1	ENSAMXP00000045955	ENSAMXP00000052618	Ataxin 1-like.	HMG-box transcription factor 1.	0.401
hbp1	ENSAMXP00000045999	ENSAMXP00000052618	ENSAMXP00000045999	HMG-box transcription factor 1.	Ataxin 1a.	0.406
hbp1	LOC103029611	ENSAMXP00000052618	ENSAMXP00000036655	HMG-box transcription factor 1.	Ataxin 1b.	0.406
hbp1	LOC103038298	ENSAMXP00000052618	ENSAMXP00000002788	HMG-box transcription factor 1.	AXH domain-containing protein.	0.406
hbp1	LOC111195425	ENSAMXP00000052618	ENSAMXP00000038441	HMG-box transcription factor 1.	AXH domain-containing protein.	0.406
hbp1	atxn1l	ENSAMXP00000052618	ENSAMXP00000045955	HMG-box transcription factor 1.	Ataxin 1-like.	0.401