16 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103028810	Ephrin-A5a; Belongs to the ephrin family. (234 aa)
	efnb3	Ephrin-B3b; Belongs to the ephrin family. (334 aa)
	LOC103043830	Ephrin-A1a; Belongs to the ephrin family. (224 aa)
	efnb2	Ephrin-B2a; Belongs to the ephrin family. (342 aa)
	LOC103034681	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (325 aa)
	LOC103029645	Ephrin-B3a; Belongs to the ephrin family. (332 aa)
	ENSAMXP00000031097	Ephrin-B2b. (229 aa)
	ENSAMXP00000032319	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (298 aa)
	LOC103042500	Ephrin-A3a; Belongs to the ephrin family. (224 aa)
	efnb1	Ephrin-B1; Belongs to the ephrin family. (344 aa)
	ENSAMXP00000041947	Si:dkey-246i14.3; Belongs to the ephrin family. (270 aa)
	LOC103036428	Ephrin-A2b; Belongs to the ephrin family. (206 aa)
	LOC103046441	Ephrin-A2a; Belongs to the ephrin family. (199 aa)
	LOC103021450	Ephrin-A1b; Belongs to the ephrin family. (233 aa)
	efna5	Ephrin-A5b; Belongs to the ephrin family. (230 aa)
	efna3	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (246 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000031097	ENSAMXP00000041947	ENSAMXP00000031097	ENSAMXP00000041947	Ephrin-B2b.	Si:dkey-246i14.3; Belongs to the ephrin family.	0.456
ENSAMXP00000031097	LOC103028810	ENSAMXP00000031097	ENSAMXP00000052157	Ephrin-B2b.	Ephrin-A5a; Belongs to the ephrin family.	0.478
ENSAMXP00000031097	LOC103036428	ENSAMXP00000031097	ENSAMXP00000042287	Ephrin-B2b.	Ephrin-A2b; Belongs to the ephrin family.	0.662
ENSAMXP00000031097	LOC103042500	ENSAMXP00000031097	ENSAMXP00000035812	Ephrin-B2b.	Ephrin-A3a; Belongs to the ephrin family.	0.478
ENSAMXP00000031097	LOC103046441	ENSAMXP00000031097	ENSAMXP00000044638	Ephrin-B2b.	Ephrin-A2a; Belongs to the ephrin family.	0.400
ENSAMXP00000031097	efna3	ENSAMXP00000031097	ENSAMXP00000052356	Ephrin-B2b.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.478
ENSAMXP00000031097	efna5	ENSAMXP00000031097	ENSAMXP00000046502	Ephrin-B2b.	Ephrin-A5b; Belongs to the ephrin family.	0.478
ENSAMXP00000032319	ENSAMXP00000041947	ENSAMXP00000032319	ENSAMXP00000041947	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Si:dkey-246i14.3; Belongs to the ephrin family.	0.456
ENSAMXP00000032319	LOC103028810	ENSAMXP00000032319	ENSAMXP00000052157	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Ephrin-A5a; Belongs to the ephrin family.	0.478
ENSAMXP00000032319	LOC103036428	ENSAMXP00000032319	ENSAMXP00000042287	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Ephrin-A2b; Belongs to the ephrin family.	0.662
ENSAMXP00000032319	LOC103042500	ENSAMXP00000032319	ENSAMXP00000035812	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Ephrin-A3a; Belongs to the ephrin family.	0.478
ENSAMXP00000032319	LOC103046441	ENSAMXP00000032319	ENSAMXP00000044638	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Ephrin-A2a; Belongs to the ephrin family.	0.400
ENSAMXP00000032319	efna3	ENSAMXP00000032319	ENSAMXP00000052356	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.478
ENSAMXP00000032319	efna5	ENSAMXP00000032319	ENSAMXP00000046502	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Ephrin-A5b; Belongs to the ephrin family.	0.478
ENSAMXP00000041947	ENSAMXP00000031097	ENSAMXP00000041947	ENSAMXP00000031097	Si:dkey-246i14.3; Belongs to the ephrin family.	Ephrin-B2b.	0.456
ENSAMXP00000041947	ENSAMXP00000032319	ENSAMXP00000041947	ENSAMXP00000032319	Si:dkey-246i14.3; Belongs to the ephrin family.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.456
ENSAMXP00000041947	LOC103029645	ENSAMXP00000041947	ENSAMXP00000020565	Si:dkey-246i14.3; Belongs to the ephrin family.	Ephrin-B3a; Belongs to the ephrin family.	0.456
ENSAMXP00000041947	LOC103034681	ENSAMXP00000041947	ENSAMXP00000013633	Si:dkey-246i14.3; Belongs to the ephrin family.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.456
ENSAMXP00000041947	efnb1	ENSAMXP00000041947	ENSAMXP00000037283	Si:dkey-246i14.3; Belongs to the ephrin family.	Ephrin-B1; Belongs to the ephrin family.	0.456
ENSAMXP00000041947	efnb2	ENSAMXP00000041947	ENSAMXP00000013100	Si:dkey-246i14.3; Belongs to the ephrin family.	Ephrin-B2a; Belongs to the ephrin family.	0.456