(27 nodes) SAP domain superfamily network (Astyanax mexicanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103038267	Cerebral dopamine neurotrophic factor. (179 aa)
	Sltm	SAFB-like, transcription modulator. (1054 aa)
	HNRNPUL1	Heterogeneous nuclear ribonucleoprotein U like 1. (876 aa)
	W5LEJ6_ASTMX	Myocardin related transcription factor Bb. (812 aa)
	LOC103042131	Scaffold attachment factor B. (860 aa)
	W5LN73_ASTMX	Ring finger protein 34b. (383 aa)
	ENSAMXP00000028529	Zgc:171740. (248 aa)
	LOC103030198	Protein inhibitor of activated STAT, 4b. (432 aa)
	ENSAMXP00000031557	Si:dkeyp-69b9.3. (608 aa)
	LOC103024124	Apoptotic chromatin condensation inducer 1b. (1350 aa)
	MYOCD	Myocardin. (999 aa)
	rffl	Ring finger and FYVE-like domain containing E3 ubiquitin protein ligase. (360 aa)
	LOC103029229	Si:ch211-107m4.1. (784 aa)
	eri1	Exoribonuclease 1. (341 aa)
	ENSAMXP00000044814	SAP domain-containing protein. (580 aa)
	LOC103047336	Myocardin related transcription factor Ab. (1195 aa)
	manf	Mesencephalic astrocyte-derived neurotrophic factor. (180 aa)
	ENSAMXP00000052999	SAP domain-containing protein. (66 aa)
	W5KFF8_ASTMX	Protein inhibitor of activated STAT, 1a. (670 aa)
	W5K5I8_ASTMX	Protein inhibitor of activated STAT, 1b. (636 aa)
	W5K4H2_ASTMX	Protein inhibitor of activated STAT, 2. (590 aa)
	W5K1E6_ASTMX	Cell division cycle and apoptosis regulator 1. (1120 aa)
	W5KEG3_ASTMX	Ring finger protein 34a. (340 aa)
	sarnp	SAP domain containing ribonucleoprotein. (210 aa)
	W5KAY5_ASTMX	Uncharacterized protein. (730 aa)
	xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6. (609 aa)
	sf3b2	Splicing factor 3b, subunit 2. (886 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000044814	LOC103042131	ENSAMXP00000044814	ENSAMXP00000018697	SAP domain-containing protein.	Scaffold attachment factor B.	0.492
HNRNPUL1	LOC103042131	ENSAMXP00000014056	ENSAMXP00000018697	Heterogeneous nuclear ribonucleoprotein U like 1.	Scaffold attachment factor B.	0.478
LOC103024124	LOC103042131	ENSAMXP00000036547	ENSAMXP00000018697	Apoptotic chromatin condensation inducer 1b.	Scaffold attachment factor B.	0.530
LOC103030198	xrcc6	ENSAMXP00000028917	ENSAMXP00000007751	Protein inhibitor of activated STAT, 4b.	X-ray repair complementing defective repair in Chinese hamster cells 6.	0.535
LOC103042131	ENSAMXP00000044814	ENSAMXP00000018697	ENSAMXP00000044814	Scaffold attachment factor B.	SAP domain-containing protein.	0.492
LOC103042131	HNRNPUL1	ENSAMXP00000018697	ENSAMXP00000014056	Scaffold attachment factor B.	Heterogeneous nuclear ribonucleoprotein U like 1.	0.478
LOC103042131	LOC103024124	ENSAMXP00000018697	ENSAMXP00000036547	Scaffold attachment factor B.	Apoptotic chromatin condensation inducer 1b.	0.530
LOC103042131	W5K4H2_ASTMX	ENSAMXP00000018697	ENSAMXP00000002483	Scaffold attachment factor B.	Protein inhibitor of activated STAT, 2.	0.487
LOC103042131	W5K5I8_ASTMX	ENSAMXP00000018697	ENSAMXP00000002849	Scaffold attachment factor B.	Protein inhibitor of activated STAT, 1b.	0.487
LOC103042131	W5KAY5_ASTMX	ENSAMXP00000018697	ENSAMXP00000004746	Scaffold attachment factor B.	Uncharacterized protein.	0.478
LOC103042131	W5KFF8_ASTMX	ENSAMXP00000018697	ENSAMXP00000006319	Scaffold attachment factor B.	Protein inhibitor of activated STAT, 1a.	0.487
Sltm	sf3b2	ENSAMXP00000012761	ENSAMXP00000008153	SAFB-like, transcription modulator.	Splicing factor 3b, subunit 2.	0.464
W5K4H2_ASTMX	LOC103042131	ENSAMXP00000002483	ENSAMXP00000018697	Protein inhibitor of activated STAT, 2.	Scaffold attachment factor B.	0.487
W5K4H2_ASTMX	xrcc6	ENSAMXP00000002483	ENSAMXP00000007751	Protein inhibitor of activated STAT, 2.	X-ray repair complementing defective repair in Chinese hamster cells 6.	0.639
W5K5I8_ASTMX	LOC103042131	ENSAMXP00000002849	ENSAMXP00000018697	Protein inhibitor of activated STAT, 1b.	Scaffold attachment factor B.	0.487
W5K5I8_ASTMX	xrcc6	ENSAMXP00000002849	ENSAMXP00000007751	Protein inhibitor of activated STAT, 1b.	X-ray repair complementing defective repair in Chinese hamster cells 6.	0.639
W5KAY5_ASTMX	LOC103042131	ENSAMXP00000004746	ENSAMXP00000018697	Uncharacterized protein.	Scaffold attachment factor B.	0.478
W5KFF8_ASTMX	LOC103042131	ENSAMXP00000006319	ENSAMXP00000018697	Protein inhibitor of activated STAT, 1a.	Scaffold attachment factor B.	0.487
W5KFF8_ASTMX	xrcc6	ENSAMXP00000006319	ENSAMXP00000007751	Protein inhibitor of activated STAT, 1a.	X-ray repair complementing defective repair in Chinese hamster cells 6.	0.639
sf3b2	Sltm	ENSAMXP00000008153	ENSAMXP00000012761	Splicing factor 3b, subunit 2.	SAFB-like, transcription modulator.	0.464