STRINGSTRING
LOC103029032 LOC103029032 uba52 uba52 PARD3 PARD3 LOC103042559 LOC103042559 LOC103044996 LOC103044996 smurf1 smurf1 UBB UBB pard6a pard6a rps27a rps27a f11r f11r LOC103034175 LOC103034175 tgfb1 tgfb1 W5KF46_ASTMX W5KF46_ASTMX LOC103024607 LOC103024607 W5KYP8_ASTMX W5KYP8_ASTMX W5L7A1_ASTMX W5L7A1_ASTMX Arhgef18 Arhgef18 tgfbr2 tgfbr2 Cgn Cgn
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103029032Par-3 family cell polarity regulator beta b. (1199 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
PARD3Par-3 family cell polarity regulator. (1394 aa)
LOC103042559Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
LOC103044996Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (597 aa)
smurf1E3 ubiquitin-protein ligase. (731 aa)
UBBUbiquitin B. (394 aa)
pard6aPar-6 family cell polarity regulator alpha. (392 aa)
rps27aRibosomal protein S27a. (156 aa)
f11rF11 receptor, tandem duplicate 1. (301 aa)
LOC103034175Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (496 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
W5KF46_ASTMXTGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (561 aa)
LOC103024607Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
W5KYP8_ASTMXPar-3 family cell polarity regulator alpha, b. (1298 aa)
W5L7A1_ASTMXPar-3 family cell polarity regulator beta a. (1088 aa)
Arhgef18Rho/rac guanine nucleotide exchange factor (GEF) 18b. (1172 aa)
tgfbr2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (595 aa)
CgnSi:dkey-238m4.3. (223 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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