STRINGSTRING
LOC103027845 LOC103027845 parp1 parp1 snw1 snw1 ENSAMXP00000050414 ENSAMXP00000050414 W5L1R3_ASTMX W5L1R3_ASTMX LOC103046211 LOC103046211 SMURF2 SMURF2 LOC103045580 LOC103045580 W5LD66_ASTMX W5LD66_ASTMX skil skil LOC103041389 LOC103041389 LOC103022359 LOC103022359 LOC103029394 LOC103029394 ENSAMXP00000053345 ENSAMXP00000053345 W5LKA6_ASTMX W5LKA6_ASTMX Ncor2 Ncor2 ENSAMXP00000028486 ENSAMXP00000028486 LOC103031474 LOC103031474 LOC103027004 LOC103027004 uba52 uba52 smad2 smad2 LOC103037767 LOC103037767 rps27a rps27a ube2d1 ube2d1 atp1b4 atp1b4 trim33 trim33 UBB UBB LOC103027811 LOC103027811 nedd4l nedd4l mapk1 mapk1 Usp9x Usp9x
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103027845SKI-like proto-oncogene b. (715 aa)
parp1Poly [ADP-ribose] polymerase. (1021 aa)
snw1SNW domain containing 1. (539 aa)
ENSAMXP00000050414E3 ubiquitin-protein ligase. (752 aa)
W5L1R3_ASTMXUSP domain-containing protein; Belongs to the peptidase C19 family. (2529 aa)
LOC103046211V-ski avian sarcoma viral oncogene homolog a. (790 aa)
SMURF2E3 ubiquitin-protein ligase. (761 aa)
LOC103045580Homeobox domain-containing protein. (408 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
skilSKI-like proto-oncogene a. (681 aa)
LOC103041389Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (392 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
W5LKA6_ASTMXNuclear receptor corepressor 1. (2396 aa)
Ncor2Nuclear receptor corepressor 2. (2241 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
LOC103031474V-ski avian sarcoma viral oncogene homolog b. (964 aa)
LOC103027004Mothers against decapentaplegic homolog. (424 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
smad2Mothers against decapentaplegic homolog. (468 aa)
LOC103037767TGFB-induced factor homeobox 1. (253 aa)
rps27aRibosomal protein S27a. (156 aa)
ube2d1Ubiquitin-conjugating enzyme E2D 1b; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
atp1b4Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (349 aa)
trim33Tripartite motif containing 33. (1251 aa)
UBBUbiquitin B. (394 aa)
LOC103027811Mothers against decapentaplegic homolog. (425 aa)
nedd4lNEDD4 like E3 ubiquitin protein ligase. (1269 aa)
mapk1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (410 aa)
Usp9xUbiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2524 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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