18 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSAMXP00000041750	Uncharacterized protein. (104 aa)
	LOC103041458	Si:ch211-269e2.1. (1180 aa)
	smc3	Structural maintenance of chromosomes protein. (1217 aa)
	W5KDX2_ASTMX	Stromal antigen 2b. (1226 aa)
	nipbl	Nipped-B protein. (2745 aa)
	LOC103044077	Stromal antigen 2a. (1255 aa)
	W5KR05_ASTMX	Stromal antigen 3. (365 aa)
	W5KX19_ASTMX	PDS5 cohesin associated factor B. (1162 aa)
	LOC103030832	RAD21 cohesin complex component like 1. (550 aa)
	smc1a	Structural maintenance of chromosomes protein. (1231 aa)
	W5LMH3_ASTMX	Structural maintenance of chromosomes protein. (1229 aa)
	rad21	RAD21 cohesin complex component b. (636 aa)
	stag1	Stromal antigen 1b. (1257 aa)
	Wapl	WAPL cohesin release factor b. (1208 aa)
	ENSAMXP00000051046	Structural maintenance of chromosomes protein. (1209 aa)
	LOC103039334	RAD21 cohesin complex component a. (637 aa)
	mau2	MAU2 sister chromatid cohesion factor. (598 aa)
	pds5a	PDS5 cohesin associated factor A. (1413 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000041750	ENSAMXP00000051046	ENSAMXP00000041750	ENSAMXP00000051046	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.910
ENSAMXP00000041750	LOC103030832	ENSAMXP00000041750	ENSAMXP00000013363	Uncharacterized protein.	RAD21 cohesin complex component like 1.	0.905
ENSAMXP00000041750	LOC103039334	ENSAMXP00000041750	ENSAMXP00000032739	Uncharacterized protein.	RAD21 cohesin complex component a.	0.905
ENSAMXP00000041750	LOC103041458	ENSAMXP00000041750	ENSAMXP00000002648	Uncharacterized protein.	Si:ch211-269e2.1.	0.861
ENSAMXP00000041750	LOC103044077	ENSAMXP00000041750	ENSAMXP00000007756	Uncharacterized protein.	Stromal antigen 2a.	0.861
ENSAMXP00000041750	W5KDX2_ASTMX	ENSAMXP00000041750	ENSAMXP00000005783	Uncharacterized protein.	Stromal antigen 2b.	0.861
ENSAMXP00000041750	W5KR05_ASTMX	ENSAMXP00000041750	ENSAMXP00000010017	Uncharacterized protein.	Stromal antigen 3.	0.861
ENSAMXP00000041750	W5KX19_ASTMX	ENSAMXP00000041750	ENSAMXP00000012131	Uncharacterized protein.	PDS5 cohesin associated factor B.	0.904
ENSAMXP00000041750	W5LMH3_ASTMX	ENSAMXP00000041750	ENSAMXP00000021035	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.915
ENSAMXP00000041750	Wapl	ENSAMXP00000041750	ENSAMXP00000032729	Uncharacterized protein.	WAPL cohesin release factor b.	0.877
ENSAMXP00000041750	mau2	ENSAMXP00000041750	ENSAMXP00000034013	Uncharacterized protein.	MAU2 sister chromatid cohesion factor.	0.928
ENSAMXP00000041750	pds5a	ENSAMXP00000041750	ENSAMXP00000036027	Uncharacterized protein.	PDS5 cohesin associated factor A.	0.904
ENSAMXP00000041750	rad21	ENSAMXP00000041750	ENSAMXP00000021316	Uncharacterized protein.	RAD21 cohesin complex component b.	0.905
ENSAMXP00000041750	smc1a	ENSAMXP00000041750	ENSAMXP00000013522	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.915
ENSAMXP00000041750	smc3	ENSAMXP00000041750	ENSAMXP00000004591	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.979
ENSAMXP00000041750	stag1	ENSAMXP00000041750	ENSAMXP00000028807	Uncharacterized protein.	Stromal antigen 1b.	0.861
ENSAMXP00000051046	ENSAMXP00000041750	ENSAMXP00000051046	ENSAMXP00000041750	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.910
ENSAMXP00000051046	LOC103030832	ENSAMXP00000051046	ENSAMXP00000013363	Structural maintenance of chromosomes protein.	RAD21 cohesin complex component like 1.	0.937
ENSAMXP00000051046	LOC103039334	ENSAMXP00000051046	ENSAMXP00000032739	Structural maintenance of chromosomes protein.	RAD21 cohesin complex component a.	0.937
ENSAMXP00000051046	LOC103041458	ENSAMXP00000051046	ENSAMXP00000002648	Structural maintenance of chromosomes protein.	Si:ch211-269e2.1.	0.869