STRINGSTRING
srsf3 srsf3 snrnp40 snrnp40 smndc1 smndc1 pnn pnn LOC103029514 LOC103029514 txnl4a txnl4a srsf1 srsf1 Znf318 Znf318 ENSAMXP00000037494 ENSAMXP00000037494 DDX41 DDX41 LOC103038251 LOC103038251 zmat2 zmat2 Srrm1 Srrm1 ddx42 ddx42 rbm8a rbm8a Ncmap Ncmap LOC111193749 LOC111193749 LOC103024124 LOC103024124 snrpb snrpb snrpd3 snrpd3 ZNF830 ZNF830 Ppil1 Ppil1 prpf18 prpf18 ENSAMXP00000035178 ENSAMXP00000035178 ptbp1 ptbp1 snrnp48 snrnp48 ENSAMXP00000034843 ENSAMXP00000034843 LOC103045376 LOC103045376 Ppp1r8 Ppp1r8 ENSAMXP00000033833 ENSAMXP00000033833 spaca6 spaca6 SUGP1 SUGP1 dhx16 dhx16 LOC103030091 LOC103030091 polr2l polr2l LOC103041055 LOC103041055 ENSAMXP00000032403 ENSAMXP00000032403 LOC103033517 LOC103033517 snrnp70 snrnp70 snrnp27 snrnp27 ENSAMXP00000031571 ENSAMXP00000031571 nsrp1 nsrp1 snrpc snrpc LOC103026145 LOC103026145 ENSAMXP00000031118 ENSAMXP00000031118 txnl4b txnl4b LOC103022728 LOC103022728 LOC103027270 LOC103027270 prcc prcc sap18 sap18 snrpg snrpg ENSAMXP00000030331 ENSAMXP00000030331 gcfc2 gcfc2 ENSAMXP00000030228 ENSAMXP00000030228 parpbp parpbp sf3a2 sf3a2 ENSAMXP00000029484 ENSAMXP00000029484 Dnajc8 Dnajc8 Nktr Nktr TCERG1L TCERG1L luc7l luc7l LOC103032686 LOC103032686 cwc27 cwc27 lsm2 lsm2 srsf5 srsf5 LOC103041383 LOC103041383 LOC103024569 LOC103024569 mfap1 mfap1 ENSAMXP00000027774 ENSAMXP00000027774 pcbp2 pcbp2 ddx46 ddx46 usp39 usp39 Snrnp35 Snrnp35 W5LRW4_ASTMX W5LRW4_ASTMX W5LR04_ASTMX W5LR04_ASTMX LOC103042992 LOC103042992 W5LQW7_ASTMX W5LQW7_ASTMX Cherp Cherp daw1 daw1 HNRNPH3 HNRNPH3 W5LP60_ASTMX W5LP60_ASTMX hnrnpr hnrnpr DHX35 DHX35 prpf8 prpf8 Gpatch1 Gpatch1 rbmx rbmx dhx34 dhx34 LOC103047438 LOC103047438 POLR2E POLR2E Tfip11 Tfip11 Ppie Ppie mtrex mtrex slirp slirp zrsr2 zrsr2 crnkl1 crnkl1 LOC103042292 LOC103042292 ddx23 ddx23 xab2 xab2 Sf3a3 Sf3a3 LOC103022114 LOC103022114 W5LAL4_ASTMX W5LAL4_ASTMX NCBP1 NCBP1 ccdc12 ccdc12 W5L9Z9_ASTMX W5L9Z9_ASTMX W5L9Q8_ASTMX W5L9Q8_ASTMX SRRM3 SRRM3 Dhx33 Dhx33 LOC103044580 LOC103044580 Cwc22 Cwc22 hnrnpl hnrnpl aqr aqr ybx1 ybx1 ppil4 ppil4 tprg1l tprg1l cdc40 cdc40 sde2 sde2 HNRNPUL1 HNRNPUL1 W5L2D6_ASTMX W5L2D6_ASTMX W5L1P0_ASTMX W5L1P0_ASTMX POLR2F POLR2F polr2c polr2c Ppig Ppig cunh9orf78 cunh9orf78 prpf31 prpf31 leng1 leng1 Bcas2 Bcas2 ppp1r10 ppp1r10 LOC103043042 LOC103043042 rnf113a rnf113a hnrnpk hnrnpk W5KU27_ASTMX W5KU27_ASTMX LOC103030615 LOC103030615 bud31 bud31 dqx1 dqx1 snw1 snw1 polr2d polr2d LOC103030148 LOC103030148 LOC103022692 LOC103022692 htatsf1 htatsf1 sf3b4 sf3b4 LOC103023872 LOC103023872 sf3b2 sf3b2 Ppil3 Ppil3 cwc15 cwc15 polr2j polr2j Snrpf Snrpf alyref alyref prpf3 prpf3 sart1 sart1 Rbm41 Rbm41 hnrnpa3 hnrnpa3 rbmx2 rbmx2 Hnrnpll Hnrnpll snrpd1 snrpd1 Snrpa1 Snrpa1 UBL5 UBL5 ENSAMXP00000044237 ENSAMXP00000044237 LOC103040524 LOC103040524 ENSAMXP00000044553 ENSAMXP00000044553 yju2 yju2 ENSAMXP00000044814 ENSAMXP00000044814 rbm17 rbm17 LOC103026575 LOC103026575 LOC103030467 LOC103030467 LOC103031855 LOC103031855 wdr53 wdr53 LOC103041055-2 LOC103041055-2 LOC103021383 LOC103021383 phf5a phf5a ppwd1 ppwd1 snrnp25 snrnp25 slu7 slu7 LOC103024726 LOC103024726 dhx15 dhx15 Rbm22 Rbm22 Rnps1 Rnps1 c3hxorf56 c3hxorf56 ENSAMXP00000047138 ENSAMXP00000047138 ENSAMXP00000047763 ENSAMXP00000047763 dhx8 dhx8 ENSAMXP00000048080 ENSAMXP00000048080 plrg1 plrg1 LOC103043638 LOC103043638 ENSAMXP00000048597 ENSAMXP00000048597 Wbp11 Wbp11 prpf38a prpf38a ENSAMXP00000049087 ENSAMXP00000049087 hnrnpab hnrnpab pqbp1 pqbp1 TCERG1 TCERG1 LOC103025597 LOC103025597 YBX2 YBX2 LOC103025321 LOC103025321 LOC103023708 LOC103023708 snrpb2 snrpb2 srek1 srek1 ENSAMXP00000051040 ENSAMXP00000051040 ENSAMXP00000051292 ENSAMXP00000051292 carhsp1 carhsp1 LOC103037989 LOC103037989 srsf7 srsf7 zmat5 zmat5 WDR70 WDR70 LOC103035453 LOC103035453 W5KH70_ASTMX W5KH70_ASTMX W5KFU7_ASTMX W5KFU7_ASTMX W5KE90_ASTMX W5KE90_ASTMX snrnp200 snrnp200 hnrnph1 hnrnph1 LOC103038555 LOC103038555 W5KDN1_ASTMX W5KDN1_ASTMX LOC103027102 LOC103027102 W5KC98_ASTMX W5KC98_ASTMX W5KAY5_ASTMX W5KAY5_ASTMX LOC103047344 LOC103047344 bud13 bud13 POLR2B POLR2B syf2 syf2 W5K8M5_ASTMX W5K8M5_ASTMX W5K8F2_ASTMX W5K8F2_ASTMX LOC103029311 LOC103029311 Sf1 Sf1 LOC103036377 LOC103036377 sf3b3 sf3b3 W5K6G0_ASTMX W5K6G0_ASTMX LOC103043364 LOC103043364 Pdcd7 Pdcd7 W5K5U6_ASTMX W5K5U6_ASTMX LOC103028658 LOC103028658 LOC103039972 LOC103039972 sf3b1 sf3b1 prpf6 prpf6 LOC103047343 LOC103047343 polr2h polr2h W5K2J8_ASTMX W5K2J8_ASTMX W5K1V7_ASTMX W5K1V7_ASTMX W5K1U8_ASTMX W5K1U8_ASTMX hnrnpdl hnrnpdl LOC103022948 LOC103022948 LIN28B LIN28B W5K1E6_ASTMX W5K1E6_ASTMX ppil2 ppil2 Cdc5l Cdc5l Ik Ik eftud2 eftud2 NKAP NKAP W5JXZ5_ASTMX W5JXZ5_ASTMX Srrt Srrt fam50a fam50a LOC103041487 LOC103041487 ENSAMXP00000054721 ENSAMXP00000054721 casc3 casc3 SNIP1 SNIP1 LOC103041973 LOC103041973 polr2k polr2k lsm8 lsm8 rnpc3 rnpc3 snrpa snrpa Ctnnbl1 Ctnnbl1 zcrb1 zcrb1 LOC103042138 LOC103042138 prpf19 prpf19 snrpd2 snrpd2 ENSAMXP00000043880 ENSAMXP00000043880 polr2g polr2g CSDC2 CSDC2 Nol8 Nol8 ENSAMXP00000041882 ENSAMXP00000041882 U2surp U2surp ENSAMXP00000041814 ENSAMXP00000041814 LOC103026935 LOC103026935 LOC103042719 LOC103042719 LOC103047758 LOC103047758 ENSAMXP00000041631 ENSAMXP00000041631 DDX5 DDX5 eif4a3 eif4a3 polr2i polr2i Lrmda Lrmda ENSAMXP00000040373 ENSAMXP00000040373 ENSAMXP00000040278 ENSAMXP00000040278 WDR25 WDR25 ENSAMXP00000039911 ENSAMXP00000039911 luc7l3 luc7l3 ENSAMXP00000039716 ENSAMXP00000039716 ENSAMXP00000039314 ENSAMXP00000039314 prkrip1 prkrip1 sf3b6 sf3b6 ENSAMXP00000039119 ENSAMXP00000039119 sf3a1 sf3a1 polr2a polr2a Ncbp2 Ncbp2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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srsf3Serine and arginine rich splicing factor 3. (172 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (378 aa)
smndc1Survival motor neuron domain containing 1. (254 aa)
pnnPinin, desmosome associated protein. (741 aa)
LOC103029514Serine and arginine rich splicing factor 5b. (260 aa)
txnl4aThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
srsf1Serine and arginine rich splicing factor 1a. (252 aa)
Znf318Zinc finger protein 318. (2088 aa)
ENSAMXP00000037494Uncharacterized protein. (448 aa)
DDX41DEAD-box helicase 41. (623 aa)
LOC103038251Pre-mRNA processing factor 4Ba. (988 aa)
zmat2Zinc finger, matrin-type 2. (209 aa)
Srrm1PWI domain-containing protein. (230 aa)
ddx42DEAD (Asp-Glu-Ala-Asp) box helicase 42. (943 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
NcmapSi:dkey-221l4.10. (150 aa)
LOC111193749Uncharacterized protein. (91 aa)
LOC103024124Apoptotic chromatin condensation inducer 1b. (1350 aa)
snrpbSmall nuclear ribonucleoprotein-associated protein. (238 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (128 aa)
ZNF830Zinc finger protein 830. (379 aa)
Ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (176 aa)
prpf18PRP18 pre-mRNA processing factor 18 homolog (yeast). (383 aa)
ENSAMXP00000035178Uncharacterized protein. (379 aa)
ptbp1Polypyrimidine tract binding protein 1b. (566 aa)
snrnp48Small nuclear ribonucleoprotein 48 (U11/U12). (332 aa)
ENSAMXP00000034843Uncharacterized protein. (55 aa)
LOC103045376Serine and arginine rich splicing factor 3a. (168 aa)
Ppp1r8Protein phosphatase 1, regulatory subunit 8b. (338 aa)
ENSAMXP00000033833Uncharacterized protein. (340 aa)
spaca6Ig-like domain-containing protein. (336 aa)
SUGP1SURP and G-patch domain containing 1. (631 aa)
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (1053 aa)
LOC103030091Polypyrimidine tract binding protein 2b. (538 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC103041055Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (93 aa)
ENSAMXP00000032403Zgc:55733. (274 aa)
LOC103033517Serine and arginine rich splicing factor 9. (242 aa)
snrnp70RRM domain-containing protein. (499 aa)
snrnp27Small nuclear ribonucleoprotein 27 (U4/U6.U5). (156 aa)
ENSAMXP00000031571Cold inducible RNA binding protein b. (243 aa)
nsrp1Nuclear speckle splicing regulatory protein 1. (458 aa)
snrpcU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (182 aa)
LOC103026145Synaptotagmin binding, cytoplasmic RNA interacting protein, like. (575 aa)
ENSAMXP00000031118DEAH (Asp-Glu-Ala-His) box polypeptide 32a. (752 aa)
txnl4bThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
LOC103022728Lin-28 homolog A (C. elegans). (211 aa)
LOC103027270Serine and arginine rich splicing factor 2a. (211 aa)
prccProline rich mitotic checkpoint control factor. (377 aa)
sap18Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)
snrpgSmall nuclear ribonucleoprotein G. (77 aa)
ENSAMXP00000030331Uncharacterized protein. (257 aa)
gcfc2GC-rich sequence DNA-binding factor 2. (827 aa)
ENSAMXP00000030228annotation not available (236 aa)
parpbpPARP1 binding protein. (583 aa)
sf3a2Splicing factor 3a, subunit 2. (302 aa)
ENSAMXP00000029484Uncharacterized protein. (176 aa)
Dnajc8DnaJ (Hsp40) homolog, subfamily C, member 8. (251 aa)
NktrNatural killer cell triggering receptor. (1311 aa)
TCERG1LTranscription elongation regulator 1 like. (596 aa)
luc7lLUC7-like (S. cerevisiae). (460 aa)
LOC103032686Uncharacterized protein. (446 aa)
cwc27CWC27 spliceosome associated cyclophilin. (477 aa)
lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
srsf5Serine and arginine rich splicing factor 5a. (275 aa)
LOC103041383Uncharacterized protein. (206 aa)
LOC103024569RRM domain-containing protein. (283 aa)
mfap1Microfibril associated protein 1. (441 aa)
ENSAMXP00000027774Transformer 2 beta homolog. (175 aa)
pcbp2Poly(rC) binding protein 2. (318 aa)
ddx46DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1051 aa)
usp39Ubiquitin specific peptidase 39. (508 aa)
Snrnp35Small nuclear ribonucleoprotein 35 (U11/U12). (209 aa)
W5LRW4_ASTMXUncharacterized protein. (275 aa)
W5LR04_ASTMXRNA binding motif protein 25b. (815 aa)
LOC103042992General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (265 aa)
W5LQW7_ASTMXSerine and arginine rich splicing factor 1b. (216 aa)
CherpCalcium homeostasis endoplasmic reticulum protein. (987 aa)
daw1Dynein assembly factor with WDR repeat domains 1. (415 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (397 aa)
W5LP60_ASTMXRRM domain-containing protein. (1200 aa)
hnrnprHeterogeneous nuclear ribonucleoprotein R. (633 aa)
DHX35DEAH-box helicase 35. (654 aa)
prpf8Pre-mRNA processing factor 8. (2333 aa)
Gpatch1G patch domain containing 1. (932 aa)
rbmxRNA binding motif protein X-linked. (384 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1151 aa)
LOC103047438RRM domain-containing protein. (292 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
Tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (853 aa)
PpiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (298 aa)
mtrexMtr4 exosome RNA helicase. (1007 aa)
slirpSRA stem-loop interacting RNA binding protein. (100 aa)
zrsr2Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2. (632 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (742 aa)
LOC103042292DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B. (436 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (813 aa)
xab2XPA binding protein 2. (849 aa)
Sf3a3Splicing factor 3a, subunit 3. (579 aa)
LOC103022114Protein phosphatase 1, regulatory subunit 8a. (357 aa)
W5LAL4_ASTMXSMU1 DNA replication regulator and spliceosomal factor a. (446 aa)
NCBP1Nuclear cap binding protein subunit 1. (797 aa)
ccdc12Coiled-coil domain containing 12. (163 aa)
W5L9Z9_ASTMXPAX3 and PAX7 binding protein 1. (693 aa)
W5L9Q8_ASTMXHeterogeneous nuclear ribonucleoprotein M. (676 aa)
SRRM3Serine/arginine repetitive matrix 3. (626 aa)
Dhx33DEAH (Asp-Glu-Ala-His) box polypeptide 33. (777 aa)
LOC103044580Serine and arginine rich splicing factor 10b. (281 aa)
Cwc22CWC22 spliceosome associated protein homolog. (821 aa)
hnrnplHeterogeneous nuclear ribonucleoprotein L2. (534 aa)
aqrAquarius intron-binding spliceosomal factor. (1471 aa)
ybx1Y box binding protein 1. (312 aa)
ppil4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (479 aa)
tprg1lTumor protein p63 regulated 1-like. (282 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (578 aa)
sde2SDE2 telomere maintenance homolog (S. pombe). (406 aa)
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U like 1. (876 aa)
W5L2D6_ASTMXUncharacterized protein. (301 aa)
W5L1P0_ASTMXMatrin-type domain-containing protein. (144 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
PpigPeptidylprolyl isomerase G (cyclophilin G). (700 aa)
cunh9orf78Zgc:103692. (290 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (510 aa)
leng1Leukocyte receptor cluster (LRC) member 1. (277 aa)
Bcas2BCAS2 pre-mRNA processing factor. (261 aa)
ppp1r10Protein phosphatase 1, regulatory subunit 10. (795 aa)
LOC103043042DEAH (Asp-Glu-Ala-His) box polypeptide 32b. (733 aa)
rnf113aRing finger protein 113A. (321 aa)
hnrnpkHeterogeneous nuclear ribonucleoprotein K. (431 aa)
W5KU27_ASTMXTranscription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (541 aa)
LOC103030615SMU1 DNA replication regulator and spliceosomal factor b. (539 aa)
bud31BUD31 homolog. (144 aa)
dqx1DEAQ box RNA-dependent ATPase 1. (777 aa)
snw1SNW domain containing 1. (539 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (143 aa)
LOC103030148Cold shock domain containing C2, RNA binding a. (154 aa)
LOC103022692RRM domain-containing protein. (454 aa)
htatsf1HIV-1 Tat specific factor 1. (461 aa)
sf3b4Splicing factor 3b, subunit 4. (401 aa)
LOC103023872RNA binding motif protein 5. (707 aa)
sf3b2Splicing factor 3b, subunit 2. (886 aa)
Ppil3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (167 aa)
cwc15CWC15 spliceosome associated protein homolog. (240 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
SnrpfSmall nuclear ribonucleoprotein polypeptide F. (85 aa)
alyrefAly/REF export factor. (313 aa)
prpf3PRP3 pre-mRNA processing factor 3 homolog (yeast). (708 aa)
sart1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (782 aa)
Rbm41RNA binding motif protein 41. (457 aa)
hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (355 aa)
rbmx2RRM domain-containing protein. (386 aa)
HnrnpllUncharacterized protein. (518 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (124 aa)
Snrpa1Small nuclear ribonucleoprotein polypeptide A. (232 aa)
UBL5Ubiquitin like 5. (98 aa)
ENSAMXP00000044237annotation not available (134 aa)
LOC103040524Uncharacterized protein. (212 aa)
ENSAMXP00000044553Zgc:158803. (359 aa)
yju2YJU2 splicing factor homolog. (343 aa)
ENSAMXP00000044814SAP domain-containing protein. (580 aa)
rbm17RNA binding motif protein 17. (443 aa)
LOC103026575RNA binding motif protein 6. (1336 aa)
LOC103030467General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (255 aa)
LOC103031855Tumor protein p63 regulated 1. (298 aa)
wdr53WD repeat domain 53. (394 aa)
LOC103041055-2Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
LOC103021383Heterogeneous nuclear ribonucleoprotein A1a. (374 aa)
phf5aPHD finger protein 5A. (115 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (623 aa)
snrnp25Small nuclear ribonucleoprotein 25. (219 aa)
slu7SLU7 homolog, splicing factor. (565 aa)
LOC103024726DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (620 aa)
dhx15DEAH (Asp-Glu-Ala-His) box helicase 15. (763 aa)
Rbm22RNA binding motif protein 22. (482 aa)
Rnps1RNA binding protein S1, serine-rich domain. (324 aa)
c3hxorf56Zgc:103697. (224 aa)
ENSAMXP00000047138Leucine rich melanocyte differentiation associated. (247 aa)
ENSAMXP00000047763Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1240 aa)
ENSAMXP00000048080Uncharacterized protein. (548 aa)
plrg1Pleiotropic regulator 1. (514 aa)
LOC103043638Heterogeneous nuclear ribonucleoprotein K, like. (435 aa)
ENSAMXP00000048597Uncharacterized protein. (109 aa)
Wbp11WW domain binding protein 11. (754 aa)
prpf38aPre-mRNA processing factor 38A. (313 aa)
ENSAMXP00000049087Heterogeneous nuclear ribonucleoprotein C. (268 aa)
hnrnpabHeterogeneous nuclear ribonucleoprotein A/Bb. (342 aa)
pqbp1Polyglutamine binding protein 1. (250 aa)
TCERG1Transcription elongation regulator 1. (997 aa)
LOC103025597Polypyrimidine tract binding protein 2a. (511 aa)
YBX2Y-box binding protein 2. (312 aa)
LOC103025321Heterogeneous nuclear ribonucleoprotein H1, like. (480 aa)
LOC103023708RNA binding motif protein 7. (261 aa)
snrpb2Small nuclear ribonucleoprotein polypeptide B2. (219 aa)
srek1Splicing regulatory glutamine/lysine-rich protein 1. (520 aa)
ENSAMXP00000051040Small nuclear ribonucleoprotein polypeptide A. (95 aa)
ENSAMXP00000051292Leucine rich repeat containing 51. (183 aa)
carhsp1Calcium regulated heat stable protein 1. (158 aa)
LOC103037989Poly-U binding splicing factor b. (512 aa)
srsf7Serine and arginine rich splicing factor 7b. (240 aa)
zmat5Zinc finger, matrin-type 5. (172 aa)
WDR70WD repeat domain 70. (626 aa)
LOC103035453Serine and arginine rich splicing factor 11. (460 aa)
W5KH70_ASTMXPRP4 pre-mRNA processing factor 4 homolog (yeast). (473 aa)
W5KFU7_ASTMXPolypyrimidine tract binding protein 1a. (514 aa)
W5KE90_ASTMXCactin. (706 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (2135 aa)
hnrnph1Heterogeneous nuclear ribonucleoprotein H1. (409 aa)
LOC103038555Transcription elongation regulator 1a (CA150). (1018 aa)
W5KDN1_ASTMXTransformer 2 alpha homolog. (248 aa)
LOC103027102ISY1 splicing factor homolog. (285 aa)
W5KC98_ASTMXZgc:163098. (817 aa)
W5KAY5_ASTMXUncharacterized protein. (730 aa)
LOC103047344Si:dkey-4p15.3; Belongs to the heat shock protein 70 family. (650 aa)
bud13BUD13 homolog. (519 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1053 aa)
syf2SYF2 pre-mRNA-splicing factor. (238 aa)
W5K8M5_ASTMXPolypyrimidine tract binding protein 3. (506 aa)
W5K8F2_ASTMXCWF19 like cell cycle control factor 2. (780 aa)
LOC103029311Transformer 2 beta homolog. (295 aa)
Sf1Splicing factor 1. (746 aa)
LOC103036377Poly(rC) binding protein 3. (350 aa)
sf3b3Splicing factor 3b, subunit 3. (1217 aa)
W5K6G0_ASTMXSerine and arginine rich splicing factor 6a. (376 aa)
LOC103043364Heat shock protein 8; Belongs to the heat shock protein 70 family. (650 aa)
Pdcd7Programmed cell death 7. (515 aa)
W5K5U6_ASTMXCold inducible RNA binding protein a. (158 aa)
LOC103028658Heterogeneous nuclear ribonucleoprotein A/Ba. (325 aa)
LOC103039972Pre-mRNA processing factor 4Bb. (1068 aa)
sf3b1Splicing factor 3b, subunit 1. (1315 aa)
prpf6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (974 aa)
LOC103047343Lin-28 homolog B (C. elegans). (223 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
W5K2J8_ASTMXUncharacterized protein. (444 aa)
W5K1V7_ASTMXHeterogeneous nuclear ribonucleoprotein L. (596 aa)
W5K1U8_ASTMXSerine and arginine rich splicing factor 7a. (243 aa)
hnrnpdlHeterogeneous nuclear ribonucleoprotein D-like. (300 aa)
LOC103022948Heterogeneous nuclear ribonucleoprotein D. (309 aa)
LIN28BLin-28 homolog B. (244 aa)
W5K1E6_ASTMXCell division cycle and apoptosis regulator 1. (1120 aa)
ppil2Peptidylprolyl isomerase (cyclophilin)-like 2. (526 aa)
Cdc5lCDC5 cell division cycle 5-like (S. pombe). (766 aa)
IkIK cytokine. (548 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (977 aa)
NKAPNFKB activating protein. (359 aa)
W5JXZ5_ASTMXUPF3B regulator of nonsense mediated mRNA decay. (293 aa)
SrrtSerrate RNA effector molecule homolog (Arabidopsis). (891 aa)
fam50aFamily with sequence similarity 50 member A. (333 aa)
LOC103041487Uncharacterized protein. (243 aa)
ENSAMXP00000054721Cwf21 domain-containing protein. (207 aa)
casc3Casc3 exon junction complex subunit. (758 aa)
SNIP1Smad nuclear interacting protein 1. (357 aa)
LOC103041973Poly(rC) binding protein 4. (465 aa)
polr2kUncharacterized protein. (109 aa)
lsm8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
rnpc3RNA-binding region (RNP1, RRM) containing 3. (508 aa)
snrpaSmall nuclear ribonucleoprotein polypeptide A. (281 aa)
Ctnnbl1Catenin, beta like 1. (579 aa)
zcrb1Zinc finger CCHC-type and RNA binding motif 1. (220 aa)
LOC103042138Poly-U binding splicing factor a. (625 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
ENSAMXP00000043880G patch domain and KOW motifs. (307 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
CSDC2Cold shock domain containing C2. (150 aa)
Nol8RRM domain-containing protein. (105 aa)
ENSAMXP00000041882annotation not available (166 aa)
U2surpU2 snRNP-associated SURP domain containing. (938 aa)
ENSAMXP00000041814Uncharacterized protein. (153 aa)
LOC103026935RALY RNA binding protein like. (306 aa)
LOC103042719Uncharacterized protein. (422 aa)
LOC103047758Synaptotagmin binding, cytoplasmic RNA interacting protein. (632 aa)
ENSAMXP00000041631Uncharacterized protein. (488 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (621 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LrmdaUncharacterized protein. (54 aa)
ENSAMXP00000040373Serine and arginine rich splicing factor 6. (339 aa)
ENSAMXP00000040278PRP40 pre-mRNA processing factor 40 homolog A. (797 aa)
WDR25WD repeat domain 25. (396 aa)
ENSAMXP00000039911Serine and arginine rich splicing factor 4. (284 aa)
luc7l3LUC7-like 3 pre-mRNA splicing factor. (461 aa)
ENSAMXP00000039716CWC25 spliceosome associated protein homolog. (388 aa)
ENSAMXP00000039314RRM domain-containing protein. (69 aa)
prkrip1PRKR interacting protein 1. (186 aa)
sf3b6Splicing factor 3b, subunit 6. (125 aa)
ENSAMXP00000039119Family with sequence similarity 32 member A. (87 aa)
sf3a1Splicing factor 3a, subunit 1. (786 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
Ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (168 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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