17 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Runx2	Runt-related transcription factor. (417 aa)
	ENSAMXP00000050988	Uncharacterized protein. (94 aa)
	ENSAMXP00000049079	RNA binding motif protein 4.3. (240 aa)
	LOC103042310	Upper zone of growth plate and cartilage matrix associated b. (139 aa)
	LOC103028241	Runt-related transcription factor. (464 aa)
	ENSAMXP00000035012	Uncharacterized protein. (133 aa)
	hes4	Hairy-related 9. (295 aa)
	ENSAMXP00000032387	BHLH domain-containing protein. (246 aa)
	LOC103027318	Hairy-related 8.2. (202 aa)
	ZNF521	Zinc finger protein 521. (1310 aa)
	ENSAMXP00000028486	Mothers against decapentaplegic homolog. (493 aa)
	cbfb	Core-binding factor subunit beta. (187 aa)
	LOC103029394	Mothers against decapentaplegic homolog. (544 aa)
	W5L1C8_ASTMX	Uncharacterized protein. (350 aa)
	hes1	Hairy-related 6. (270 aa)
	ar	Androgen receptor. (839 aa)
	Znf423	Si:ch211-216l23.1. (1349 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000028486	LOC103028241	ENSAMXP00000028486	ENSAMXP00000038106	Mothers against decapentaplegic homolog.	Runt-related transcription factor.	0.468
ENSAMXP00000028486	Runx2	ENSAMXP00000028486	ENSAMXP00000000899	Mothers against decapentaplegic homolog.	Runt-related transcription factor.	0.468
ENSAMXP00000028486	cbfb	ENSAMXP00000028486	ENSAMXP00000021049	Mothers against decapentaplegic homolog.	Core-binding factor subunit beta.	0.518
ENSAMXP00000049079	LOC103028241	ENSAMXP00000049079	ENSAMXP00000038106	RNA binding motif protein 4.3.	Runt-related transcription factor.	0.533
ENSAMXP00000049079	Runx2	ENSAMXP00000049079	ENSAMXP00000000899	RNA binding motif protein 4.3.	Runt-related transcription factor.	0.533
ENSAMXP00000050988	ZNF521	ENSAMXP00000050988	ENSAMXP00000029009	Uncharacterized protein.	Zinc finger protein 521.	0.867
LOC103028241	ENSAMXP00000028486	ENSAMXP00000038106	ENSAMXP00000028486	Runt-related transcription factor.	Mothers against decapentaplegic homolog.	0.468
LOC103028241	ENSAMXP00000049079	ENSAMXP00000038106	ENSAMXP00000049079	Runt-related transcription factor.	RNA binding motif protein 4.3.	0.533
LOC103028241	LOC103029394	ENSAMXP00000038106	ENSAMXP00000019787	Runt-related transcription factor.	Mothers against decapentaplegic homolog.	0.468
LOC103028241	W5L1C8_ASTMX	ENSAMXP00000038106	ENSAMXP00000013640	Runt-related transcription factor.	Uncharacterized protein.	0.501
LOC103028241	ar	ENSAMXP00000038106	ENSAMXP00000011713	Runt-related transcription factor.	Androgen receptor.	0.501
LOC103028241	cbfb	ENSAMXP00000038106	ENSAMXP00000021049	Runt-related transcription factor.	Core-binding factor subunit beta.	0.915
LOC103029394	LOC103028241	ENSAMXP00000019787	ENSAMXP00000038106	Mothers against decapentaplegic homolog.	Runt-related transcription factor.	0.468
LOC103029394	Runx2	ENSAMXP00000019787	ENSAMXP00000000899	Mothers against decapentaplegic homolog.	Runt-related transcription factor.	0.468
LOC103029394	cbfb	ENSAMXP00000019787	ENSAMXP00000021049	Mothers against decapentaplegic homolog.	Core-binding factor subunit beta.	0.518
Runx2	ENSAMXP00000028486	ENSAMXP00000000899	ENSAMXP00000028486	Runt-related transcription factor.	Mothers against decapentaplegic homolog.	0.468
Runx2	ENSAMXP00000049079	ENSAMXP00000000899	ENSAMXP00000049079	Runt-related transcription factor.	RNA binding motif protein 4.3.	0.533
Runx2	LOC103029394	ENSAMXP00000000899	ENSAMXP00000019787	Runt-related transcription factor.	Mothers against decapentaplegic homolog.	0.468
Runx2	W5L1C8_ASTMX	ENSAMXP00000000899	ENSAMXP00000013640	Runt-related transcription factor.	Uncharacterized protein.	0.501
Runx2	ar	ENSAMXP00000000899	ENSAMXP00000011713	Runt-related transcription factor.	Androgen receptor.	0.501