24 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103029394	Mothers against decapentaplegic homolog. (544 aa)
	LOC103022611	Forkhead box O4. (631 aa)
	ccng2	Cyclin G2; Belongs to the cyclin family. (333 aa)
	W5LD66_ASTMX	Mothers against decapentaplegic homolog. (573 aa)
	LOC103022359	Mothers against decapentaplegic homolog. (587 aa)
	mstn	Myostatin b. (435 aa)
	W5LTK0_ASTMX	Forkhead box G1b. (323 aa)
	W5LU00_ASTMX	Forkhead box G1a. (337 aa)
	ENSAMXP00000028486	Mothers against decapentaplegic homolog. (493 aa)
	ENSAMXP00000029520	Fork-head domain-containing protein. (286 aa)
	ENSAMXP00000031040	Forkhead box O6 b. (678 aa)
	ENSAMXP00000031283	Fork-head domain-containing protein. (312 aa)
	LOC103027004	Mothers against decapentaplegic homolog. (424 aa)
	foxo3	Forkhead box O3b. (651 aa)
	LOC103026113	Forkhead box O3A. (646 aa)
	LOC103046520	Forkhead box O1 b. (638 aa)
	LOC103024851	Forkhead box O6 a. (664 aa)
	smad2	Mothers against decapentaplegic homolog. (468 aa)
	LOC103025287	Myostatin a. (348 aa)
	gdf11	Growth differentiation factor 11. (409 aa)
	LOC103027811	Mothers against decapentaplegic homolog. (425 aa)
	foxo1	Forkhead box O1 a. (661 aa)
	ENSAMXP00000053345	MH1 domain-containing protein. (187 aa)
	btg1	B-cell translocation gene 1, anti-proliferative. (172 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000028486	ENSAMXP00000029520	ENSAMXP00000028486	ENSAMXP00000029520	Mothers against decapentaplegic homolog.	Fork-head domain-containing protein.	0.425
ENSAMXP00000028486	ENSAMXP00000031283	ENSAMXP00000028486	ENSAMXP00000031283	Mothers against decapentaplegic homolog.	Fork-head domain-containing protein.	0.425
ENSAMXP00000028486	LOC103022611	ENSAMXP00000028486	ENSAMXP00000008548	Mothers against decapentaplegic homolog.	Forkhead box O4.	0.545
ENSAMXP00000028486	LOC103026113	ENSAMXP00000028486	ENSAMXP00000034226	Mothers against decapentaplegic homolog.	Forkhead box O3A.	0.545
ENSAMXP00000028486	LOC103027004	ENSAMXP00000028486	ENSAMXP00000031297	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.797
ENSAMXP00000028486	LOC103027811	ENSAMXP00000028486	ENSAMXP00000046514	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.797
ENSAMXP00000028486	LOC103046520	ENSAMXP00000028486	ENSAMXP00000034763	Mothers against decapentaplegic homolog.	Forkhead box O1 b.	0.545
ENSAMXP00000028486	W5LTK0_ASTMX	ENSAMXP00000028486	ENSAMXP00000026464	Mothers against decapentaplegic homolog.	Forkhead box G1b.	0.425
ENSAMXP00000028486	W5LU00_ASTMX	ENSAMXP00000028486	ENSAMXP00000026616	Mothers against decapentaplegic homolog.	Forkhead box G1a.	0.425
ENSAMXP00000028486	foxo1	ENSAMXP00000028486	ENSAMXP00000047550	Mothers against decapentaplegic homolog.	Forkhead box O1 a.	0.545
ENSAMXP00000028486	foxo3	ENSAMXP00000028486	ENSAMXP00000032755	Mothers against decapentaplegic homolog.	Forkhead box O3b.	0.545
ENSAMXP00000028486	smad2	ENSAMXP00000028486	ENSAMXP00000035422	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.785
ENSAMXP00000029520	ENSAMXP00000028486	ENSAMXP00000029520	ENSAMXP00000028486	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000029520	ENSAMXP00000053345	ENSAMXP00000029520	ENSAMXP00000053345	Fork-head domain-containing protein.	MH1 domain-containing protein.	0.425
ENSAMXP00000029520	LOC103022359	ENSAMXP00000029520	ENSAMXP00000018891	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425
ENSAMXP00000029520	LOC103022611	ENSAMXP00000029520	ENSAMXP00000008548	Fork-head domain-containing protein.	Forkhead box O4.	0.424
ENSAMXP00000029520	LOC103026113	ENSAMXP00000029520	ENSAMXP00000034226	Fork-head domain-containing protein.	Forkhead box O3A.	0.424
ENSAMXP00000029520	LOC103027004	ENSAMXP00000029520	ENSAMXP00000031297	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.428
ENSAMXP00000029520	LOC103027811	ENSAMXP00000029520	ENSAMXP00000046514	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.428
ENSAMXP00000029520	LOC103029394	ENSAMXP00000029520	ENSAMXP00000019787	Fork-head domain-containing protein.	Mothers against decapentaplegic homolog.	0.425