12 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tg	Thyroglobulin. (2760 aa)
	ENSAMXP00000029480	COesterase domain-containing protein. (248 aa)
	ENSAMXP00000035901	COesterase domain-containing protein. (188 aa)
	ENSAMXP00000037017	COesterase domain-containing protein. (139 aa)
	ENSAMXP00000038340	Uncharacterized protein. (188 aa)
	ENSAMXP00000050003	COesterase domain-containing protein. (90 aa)
	CES3	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (395 aa)
	LOC103038331	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (595 aa)
	LOC103045798	Neuroligin 3b. (836 aa)
	W5L1C3_ASTMX	Si:ch73-89b15.3. (255 aa)
	Nlgn3	Neuroligin 3a. (844 aa)
	W5LBA0_ASTMX	Neuroligin 1. (586 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CES3	ENSAMXP00000035901	ENSAMXP00000043900	ENSAMXP00000035901	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	COesterase domain-containing protein.	0.543
CES3	ENSAMXP00000037017	ENSAMXP00000043900	ENSAMXP00000037017	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	COesterase domain-containing protein.	0.542
ENSAMXP00000029480	ENSAMXP00000035901	ENSAMXP00000029480	ENSAMXP00000035901	COesterase domain-containing protein.	COesterase domain-containing protein.	0.454
ENSAMXP00000029480	ENSAMXP00000037017	ENSAMXP00000029480	ENSAMXP00000037017	COesterase domain-containing protein.	COesterase domain-containing protein.	0.477
ENSAMXP00000029480	ENSAMXP00000050003	ENSAMXP00000029480	ENSAMXP00000050003	COesterase domain-containing protein.	COesterase domain-containing protein.	0.444
ENSAMXP00000029480	LOC103038331	ENSAMXP00000029480	ENSAMXP00000001376	COesterase domain-containing protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.403
ENSAMXP00000029480	W5L1C3_ASTMX	ENSAMXP00000029480	ENSAMXP00000013635	COesterase domain-containing protein.	Si:ch73-89b15.3.	0.441
ENSAMXP00000035901	CES3	ENSAMXP00000035901	ENSAMXP00000043900	COesterase domain-containing protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.543
ENSAMXP00000035901	ENSAMXP00000029480	ENSAMXP00000035901	ENSAMXP00000029480	COesterase domain-containing protein.	COesterase domain-containing protein.	0.454
ENSAMXP00000035901	ENSAMXP00000037017	ENSAMXP00000035901	ENSAMXP00000037017	COesterase domain-containing protein.	COesterase domain-containing protein.	0.541
ENSAMXP00000035901	ENSAMXP00000038340	ENSAMXP00000035901	ENSAMXP00000038340	COesterase domain-containing protein.	Uncharacterized protein.	0.536
ENSAMXP00000035901	W5LBA0_ASTMX	ENSAMXP00000035901	ENSAMXP00000017112	COesterase domain-containing protein.	Neuroligin 1.	0.750
ENSAMXP00000037017	CES3	ENSAMXP00000037017	ENSAMXP00000043900	COesterase domain-containing protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.542
ENSAMXP00000037017	ENSAMXP00000029480	ENSAMXP00000037017	ENSAMXP00000029480	COesterase domain-containing protein.	COesterase domain-containing protein.	0.477
ENSAMXP00000037017	ENSAMXP00000035901	ENSAMXP00000037017	ENSAMXP00000035901	COesterase domain-containing protein.	COesterase domain-containing protein.	0.541
ENSAMXP00000037017	ENSAMXP00000050003	ENSAMXP00000037017	ENSAMXP00000050003	COesterase domain-containing protein.	COesterase domain-containing protein.	0.542
ENSAMXP00000037017	W5LBA0_ASTMX	ENSAMXP00000037017	ENSAMXP00000017112	COesterase domain-containing protein.	Neuroligin 1.	0.527
ENSAMXP00000038340	ENSAMXP00000035901	ENSAMXP00000038340	ENSAMXP00000035901	Uncharacterized protein.	COesterase domain-containing protein.	0.536
ENSAMXP00000038340	ENSAMXP00000050003	ENSAMXP00000038340	ENSAMXP00000050003	Uncharacterized protein.	COesterase domain-containing protein.	0.537
ENSAMXP00000038340	LOC103038331	ENSAMXP00000038340	ENSAMXP00000001376	Uncharacterized protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.529