STRINGSTRING
Smarcc2 Smarcc2 kdm1a kdm1a W5LBX2_ASTMX W5LBX2_ASTMX KDM1B KDM1B mysm1 mysm1 LOC103036726 LOC103036726
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smarcc2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1032 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (849 aa)
W5LBX2_ASTMXSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (851 aa)
KDM1BLysine demethylase 1B. (837 aa)
mysm1Myb-like, SWIRM and MPN domains 1. (852 aa)
LOC103036726SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a. (1141 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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