STRINGSTRING
W5K132_ASTMX W5K132_ASTMX W5K8B6_ASTMX W5K8B6_ASTMX six3 six3 pax6 pax6 W5LC51_ASTMX W5LC51_ASTMX RHO RHO rad21 rad21 LOC103047117 LOC103047117 W5LUX6_ASTMX W5LUX6_ASTMX LOC103040843 LOC103040843 LOC103037569 LOC103037569 oca2 oca2 TYR TYR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
W5K132_ASTMXRhodopsin. (343 aa)
W5K8B6_ASTMXProtein-tyrosine-phosphatase. (2130 aa)
six3SIX homeobox 3a. (294 aa)
pax6PAX-6 protein. (459 aa)
W5LC51_ASTMXProtein-tyrosine-phosphatase. (1320 aa)
RHORhodopsin. (354 aa)
rad21RAD21 cohesin complex component b. (636 aa)
LOC103047117Rhodopsin. (355 aa)
W5LUX6_ASTMXRhodopsin. (365 aa)
LOC103040843Tyrosinase. (539 aa)
LOC103037569Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1. (350 aa)
oca2CitMHS domain-containing protein. (857 aa)
TYRTyrosinase. (537 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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