7 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103031987	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (141 aa)
	gapdh	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	LOC103032312	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (153 aa)
	LOC103025383	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (698 aa)
	rpl7	Ribosomal protein L7. (253 aa)
	ENSAMXP00000048556	TATA box binding protein. (248 aa)
	Apaf1	Apoptotic peptidase activating factor 1. (1199 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Apaf1	LOC103025383	ENSAMXP00000051202	ENSAMXP00000039242	Apoptotic peptidase activating factor 1.	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	0.859
Apaf1	gapdh	ENSAMXP00000051202	ENSAMXP00000033086	Apoptotic peptidase activating factor 1.	Glyceraldehyde-3-phosphate dehydrogenase.	0.527
Apaf1	rpl7	ENSAMXP00000051202	ENSAMXP00000042748	Apoptotic peptidase activating factor 1.	Ribosomal protein L7.	0.425
ENSAMXP00000048556	LOC103031987	ENSAMXP00000048556	ENSAMXP00000046473	TATA box binding protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.445
ENSAMXP00000048556	LOC103032312	ENSAMXP00000048556	ENSAMXP00000038226	TATA box binding protein.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.445
ENSAMXP00000048556	gapdh	ENSAMXP00000048556	ENSAMXP00000033086	TATA box binding protein.	Glyceraldehyde-3-phosphate dehydrogenase.	0.729
ENSAMXP00000048556	rpl7	ENSAMXP00000048556	ENSAMXP00000042748	TATA box binding protein.	Ribosomal protein L7.	0.511
LOC103025383	Apaf1	ENSAMXP00000039242	ENSAMXP00000051202	Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family.	Apoptotic peptidase activating factor 1.	0.859
LOC103031987	ENSAMXP00000048556	ENSAMXP00000046473	ENSAMXP00000048556	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	TATA box binding protein.	0.445
LOC103031987	LOC103032312	ENSAMXP00000046473	ENSAMXP00000038226	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.554
LOC103032312	ENSAMXP00000048556	ENSAMXP00000038226	ENSAMXP00000048556	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	TATA box binding protein.	0.445
LOC103032312	LOC103031987	ENSAMXP00000038226	ENSAMXP00000046473	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.554
gapdh	Apaf1	ENSAMXP00000033086	ENSAMXP00000051202	Glyceraldehyde-3-phosphate dehydrogenase.	Apoptotic peptidase activating factor 1.	0.527
gapdh	ENSAMXP00000048556	ENSAMXP00000033086	ENSAMXP00000048556	Glyceraldehyde-3-phosphate dehydrogenase.	TATA box binding protein.	0.729
rpl7	Apaf1	ENSAMXP00000042748	ENSAMXP00000051202	Ribosomal protein L7.	Apoptotic peptidase activating factor 1.	0.425
rpl7	ENSAMXP00000048556	ENSAMXP00000042748	ENSAMXP00000048556	Ribosomal protein L7.	TATA box binding protein.	0.511