33 items (Astyanax mexicanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tgfb3	Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
	tgfb2	Transforming growth factor beta; Belongs to the TGF-beta family. (401 aa)
	LOC103044058	Myc target 1a. (212 aa)
	LOC103021366	Fibrinogen C-terminal domain-containing protein. (245 aa)
	plekhj1	Pleckstrin homology domain containing, family J member 1. (156 aa)
	LOC103047653	Fibrinogen C-terminal domain-containing protein. (235 aa)
	LOC103038759	Golgi glycoprotein 1b. (1147 aa)
	LOC103042476	Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
	LOC103022726	Microfibril associated protein 4. (237 aa)
	LOC103044045	Myc target 1b. (195 aa)
	tgfb1	Transforming growth factor beta; Belongs to the TGF-beta family. (386 aa)
	W5K8B6_ASTMX	Protein-tyrosine-phosphatase. (2130 aa)
	Ncoa5	Nuclear receptor coactivator 5. (468 aa)
	LOC103024607	Transforming growth factor beta; Belongs to the TGF-beta family. (377 aa)
	W5KXK5_ASTMX	Microfibril associated protein 4. (247 aa)
	LOC103022412	Microfibril associated protein 4. (239 aa)
	W5KXL9_ASTMX	Fibrinogen C-terminal domain-containing protein. (252 aa)
	W5LC51_ASTMX	Protein-tyrosine-phosphatase. (1320 aa)
	LOC103037398	Zinc finger protein 526. (1063 aa)
	p4ha1	Prolyl 4-hydroxylase, alpha polypeptide I a. (538 aa)
	Gpatch1	G patch domain containing 1. (932 aa)
	PTPRC	Protein tyrosine phosphatase receptor type C. (809 aa)
	LOC103028218	Golgi glycoprotein 1a. (1152 aa)
	dbi	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein). (87 aa)
	LOC103027665	Fibrinogen C-terminal domain-containing protein. (245 aa)
	LOC103032312	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (153 aa)
	ENSAMXP00000038731	Zinc finger protein 574. (858 aa)
	afap1l2	Actin filament associated protein 1-like 2. (900 aa)
	LOC103037233	Protein tyrosine phosphatase 4A1. (173 aa)
	LOC107196808	Fibrinogen C-terminal domain-containing protein. (248 aa)
	LOC103031987	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (141 aa)
	LOC103021906	Microfibril associated protein 4. (245 aa)
	sdhd	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family. (159 aa)

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAMXP00000038731	Gpatch1	ENSAMXP00000038731	ENSAMXP00000020779	Zinc finger protein 574.	G patch domain containing 1.	0.566
ENSAMXP00000038731	LOC103028218	ENSAMXP00000038731	ENSAMXP00000033088	Zinc finger protein 574.	Golgi glycoprotein 1a.	0.568
ENSAMXP00000038731	LOC103031987	ENSAMXP00000038731	ENSAMXP00000046473	Zinc finger protein 574.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.417
ENSAMXP00000038731	LOC103032312	ENSAMXP00000038731	ENSAMXP00000038226	Zinc finger protein 574.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.	0.417
ENSAMXP00000038731	LOC103037233	ENSAMXP00000038731	ENSAMXP00000039875	Zinc finger protein 574.	Protein tyrosine phosphatase 4A1.	0.500
ENSAMXP00000038731	LOC103038759	ENSAMXP00000038731	ENSAMXP00000048509	Zinc finger protein 574.	Golgi glycoprotein 1b.	0.535
ENSAMXP00000038731	LOC103044045	ENSAMXP00000038731	ENSAMXP00000000509	Zinc finger protein 574.	Myc target 1b.	0.601
ENSAMXP00000038731	LOC103044058	ENSAMXP00000038731	ENSAMXP00000052844	Zinc finger protein 574.	Myc target 1a.	0.503
ENSAMXP00000038731	PTPRC	ENSAMXP00000038731	ENSAMXP00000032906	Zinc finger protein 574.	Protein tyrosine phosphatase receptor type C.	0.470
ENSAMXP00000038731	afap1l2	ENSAMXP00000038731	ENSAMXP00000039691	Zinc finger protein 574.	Actin filament associated protein 1-like 2.	0.500
ENSAMXP00000038731	dbi	ENSAMXP00000038731	ENSAMXP00000034310	Zinc finger protein 574.	Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).	0.499
ENSAMXP00000038731	p4ha1	ENSAMXP00000038731	ENSAMXP00000018933	Zinc finger protein 574.	Prolyl 4-hydroxylase, alpha polypeptide I a.	0.440
ENSAMXP00000038731	plekhj1	ENSAMXP00000038731	ENSAMXP00000053836	Zinc finger protein 574.	Pleckstrin homology domain containing, family J member 1.	0.569
ENSAMXP00000038731	sdhd	ENSAMXP00000038731	ENSAMXP00000047634	Zinc finger protein 574.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	0.499
Gpatch1	ENSAMXP00000038731	ENSAMXP00000020779	ENSAMXP00000038731	G patch domain containing 1.	Zinc finger protein 574.	0.566
Gpatch1	LOC103028218	ENSAMXP00000020779	ENSAMXP00000033088	G patch domain containing 1.	Golgi glycoprotein 1a.	0.685
Gpatch1	LOC103037233	ENSAMXP00000020779	ENSAMXP00000039875	G patch domain containing 1.	Protein tyrosine phosphatase 4A1.	0.545
Gpatch1	LOC103037398	ENSAMXP00000020779	ENSAMXP00000018877	G patch domain containing 1.	Zinc finger protein 526.	0.622
Gpatch1	LOC103038759	ENSAMXP00000020779	ENSAMXP00000048509	G patch domain containing 1.	Golgi glycoprotein 1b.	0.685
Gpatch1	LOC103044045	ENSAMXP00000020779	ENSAMXP00000000509	G patch domain containing 1.	Myc target 1b.	0.677