STRINGSTRING
ENSAMXP00000053345 ENSAMXP00000053345 smad6 smad6 W5KFJ0_ASTMX W5KFJ0_ASTMX smad5 smad5 nfic nfic W5LD66_ASTMX W5LD66_ASTMX nfia nfia LOC103022359 LOC103022359 LOC103029394 LOC103029394 ENSAMXP00000028486 ENSAMXP00000028486 LOC103027004 LOC103027004 ENSAMXP00000033639 ENSAMXP00000033639 smad2 smad2 LOC103025737 LOC103025737 LOC111189355 LOC111189355 smad1 smad1 LOC103027811 LOC103027811 ENSAMXP00000049009 ENSAMXP00000049009 smad7 smad7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSAMXP00000053345MH1 domain-containing protein. (187 aa)
smad6Mothers against decapentaplegic homolog. (480 aa)
W5KFJ0_ASTMXMothers against decapentaplegic homolog. (468 aa)
smad5Mothers against decapentaplegic homolog. (464 aa)
nficNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (531 aa)
W5LD66_ASTMXMothers against decapentaplegic homolog. (573 aa)
nfiaNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (547 aa)
LOC103022359Mothers against decapentaplegic homolog. (587 aa)
LOC103029394Mothers against decapentaplegic homolog. (544 aa)
ENSAMXP00000028486Mothers against decapentaplegic homolog. (493 aa)
LOC103027004Mothers against decapentaplegic homolog. (424 aa)
ENSAMXP00000033639Mothers against decapentaplegic homolog. (425 aa)
smad2Mothers against decapentaplegic homolog. (468 aa)
LOC103025737Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (535 aa)
LOC111189355Nuclear factor I B. (245 aa)
smad1Mothers against decapentaplegic homolog. (488 aa)
LOC103027811Mothers against decapentaplegic homolog. (425 aa)
ENSAMXP00000049009Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (548 aa)
smad7Mothers against decapentaplegic homolog. (390 aa)
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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