STRINGSTRING
tmem177 tmem177 actr6 actr6 cfdp1 cfdp1 ep400 ep400 LOC108276547 LOC108276547 LOC108259939 LOC108259939 srcap srcap LOC108255943 LOC108255943
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tmem177Transmembrane protein 177. (310 aa)
actr6Actin-related protein 6 isoform X1; Belongs to the actin family. (396 aa)
cfdp1Craniofacial development protein 1; May play a role during embryogenesis. (305 aa)
ep400E1A-binding protein p400 isoform X6. (2894 aa)
LOC108276547Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC108259939Zinc finger HIT domain-containing protein 1-like. (110 aa)
srcapHelicase SRCAP isoform X2. (3873 aa)
LOC108255943Histone H2A.V. (131 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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