STRINGSTRING
fam43a fam43a c16h21orf91 c16h21orf91 tox4 tox4 plekhh2 plekhh2 neurl1b neurl1b neurl1 neurl1 plekhf2 plekhf2 LOC108270894 LOC108270894 rapsn rapsn slc25a21 slc25a21
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fam43aProtein FAM43A. (346 aa)
c16h21orf91Protein EURL homolog. (269 aa)
tox4TOX high mobility group box family member 4 isoform X2. (665 aa)
plekhh2Pleckstrin homology domain-containing family H member 2. (1299 aa)
neurl1bE3 ubiquitin-protein ligase NEURL1B isoform X1. (578 aa)
neurl1E3 ubiquitin-protein ligase NEURL1. (561 aa)
plekhf2Pleckstrin homology domain-containing family F member 2. (241 aa)
LOC108270894Collagen alpha-6(VI) chain-like. (1671 aa)
rapsn43 kDa receptor-associated protein of the synapse. (419 aa)
slc25a21Mitochondrial 2-oxodicarboxylate carrier isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (298 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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