STRINGSTRING
plk1 plk1 cdc20 cdc20 cdk1 cdk1 ccnb1 ccnb1 ccnb2 ccnb2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
plk1Serine/threonine-protein kinase PLK. (591 aa)
cdc20Cell division cycle protein 20 homolog. (538 aa)
cdk1Cyclin-dependent kinase 1 isoform X1; Belongs to the protein kinase superfamily. (302 aa)
ccnb1G2/mitotic-specific cyclin-B1 isoform X2; Belongs to the cyclin family. (401 aa)
ccnb2G2/mitotic-specific cyclin-B2 isoform X1; Belongs to the cyclin family. (398 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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