STRINGSTRING
cul1 cul1 LOC108261246 LOC108261246 kdm2a kdm2a fbxo9 fbxo9 cand1 cand1 skp1 skp1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cul1Cullin 1. (861 aa)
LOC108261246Cullin-3. (670 aa)
kdm2aLysine-specific demethylase 2A isoform X1. (1276 aa)
fbxo9F-box only protein 9 isoform X1. (423 aa)
cand1Cullin-associated NEDD8-dissociated protein 1. (1230 aa)
skp1S-phase kinase-associated protein 1; Belongs to the SKP1 family. (201 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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