10 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108257959	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1. (667 aa)
	ENSIPUP00000002468	annotation not available (101 aa)
	ska3	Spindle and kinetochore-associated protein 3 isoform X1. (609 aa)
	ENSIPUP00000008118	Biorientation of chromosomes in cell division 1. (155 aa)
	spdl1	Protein Spindly; Required for the localization of dynein and dynactin to the mitotic kintochore. Dynein is believed to control the initial lateral interaction between the kinetochore and spindle microtubules and to facilitate the subsequent formation of end-on kinetochore-microtubule attachments mediated by the NDC80 complex; Belongs to the Spindly family. (579 aa)
	ska2	Spindle and kinetochore-associated protein 2. (226 aa)
	bub1b	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta. (426 aa)
	LOC108268529	Centromere protein F-like. (1278 aa)
	ska1	Spindle and kinetochore-associated protein 1. (257 aa)
	bod1l1	Biorientation of chromosomes in cell division protein 1-like 1. (2003 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSIPUP00000002468	LOC108257959	ENSIPUP00000002468	ENSIPUP00000033966	annotation not available	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	0.676
ENSIPUP00000002468	bub1b	ENSIPUP00000002468	ENSIPUP00000029502	annotation not available	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	0.676
ENSIPUP00000002468	ska2	ENSIPUP00000002468	ENSIPUP00000027242	annotation not available	Spindle and kinetochore-associated protein 2.	0.926
ENSIPUP00000002468	ska3	ENSIPUP00000002468	ENSIPUP00000005265	annotation not available	Spindle and kinetochore-associated protein 3 isoform X1.	0.938
LOC108257959	ENSIPUP00000002468	ENSIPUP00000033966	ENSIPUP00000002468	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	annotation not available	0.676
LOC108257959	LOC108268529	ENSIPUP00000033966	ENSIPUP00000033535	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	Centromere protein F-like.	0.926
LOC108257959	ska1	ENSIPUP00000033966	ENSIPUP00000033950	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	Spindle and kinetochore-associated protein 1.	0.676
LOC108257959	ska2	ENSIPUP00000033966	ENSIPUP00000027242	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	Spindle and kinetochore-associated protein 2.	0.577
LOC108257959	ska3	ENSIPUP00000033966	ENSIPUP00000005265	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	Spindle and kinetochore-associated protein 3 isoform X1.	0.449
LOC108257959	spdl1	ENSIPUP00000033966	ENSIPUP00000025334	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	Protein Spindly; Required for the localization of dynein and dynactin to the mitotic kintochore. Dynein is believed to control the initial lateral interaction between the kinetochore and spindle microtubules and to facilitate the subsequent formation of end-on kinetochore-microtubule attachments mediated by the NDC80 complex; Belongs to the Spindly family.	0.470
LOC108268529	LOC108257959	ENSIPUP00000033535	ENSIPUP00000033966	Centromere protein F-like.	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	0.926
LOC108268529	bub1b	ENSIPUP00000033535	ENSIPUP00000029502	Centromere protein F-like.	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	0.926
LOC108268529	ska3	ENSIPUP00000033535	ENSIPUP00000005265	Centromere protein F-like.	Spindle and kinetochore-associated protein 3 isoform X1.	0.495
bub1b	ENSIPUP00000002468	ENSIPUP00000029502	ENSIPUP00000002468	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	annotation not available	0.676
bub1b	LOC108268529	ENSIPUP00000029502	ENSIPUP00000033535	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	Centromere protein F-like.	0.926
bub1b	ska1	ENSIPUP00000029502	ENSIPUP00000033950	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	Spindle and kinetochore-associated protein 1.	0.676
bub1b	ska2	ENSIPUP00000029502	ENSIPUP00000027242	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	Spindle and kinetochore-associated protein 2.	0.577
bub1b	ska3	ENSIPUP00000029502	ENSIPUP00000005265	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	Spindle and kinetochore-associated protein 3 isoform X1.	0.449
bub1b	spdl1	ENSIPUP00000029502	ENSIPUP00000025334	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.	Protein Spindly; Required for the localization of dynein and dynactin to the mitotic kintochore. Dynein is believed to control the initial lateral interaction between the kinetochore and spindle microtubules and to facilitate the subsequent formation of end-on kinetochore-microtubule attachments mediated by the NDC80 complex; Belongs to the Spindly family.	0.470
ska1	LOC108257959	ENSIPUP00000033950	ENSIPUP00000033966	Spindle and kinetochore-associated protein 1.	Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1.	0.676