STRINGSTRING
pum1 pum1 ENSIPUP00000004727 ENSIPUP00000004727 LOC108270447 LOC108270447 gsdme gsdme ube2k ube2k polr3d polr3d trim62 trim62 tbk1 tbk1 sash1 sash1 LOC108269845 LOC108269845 xrcc5 xrcc5 LOC108264585 LOC108264585 supt5h supt5h LOC108273952 LOC108273952 LOC108261378 LOC108261378 ENSIPUP00000011491 ENSIPUP00000011491 LOC108257733 LOC108257733 LOC108257559 LOC108257559 pqbp1 pqbp1 LOC108272457 LOC108272457 ENSIPUP00000013199 ENSIPUP00000013199 lsm14a lsm14a ifi35 ifi35 il12b il12b tomm70 tomm70 lamp1 lamp1 LOC108261848 LOC108261848 emilin1 emilin1 sting1 sting1 LOC108269793 LOC108269793 LOC108269798 LOC108269798 myd88 myd88 ENSIPUP00000018398 ENSIPUP00000018398 ENSIPUP00000018443 ENSIPUP00000018443 sfpq sfpq polr3f polr3f LOC108262464 LOC108262464 LOC108277410 LOC108277410 sh21a sh21a fadd fadd wap65-2 wap65-2 LOC108269388 LOC108269388 LOC108255145 LOC108255145 sh21b sh21b mmrn2 mmrn2 LOC108273898 LOC108273898 polr3b polr3b cd180 cd180 fbxo38 fbxo38 nono nono card9 card9 rnf185 rnf185 LOC108256977 LOC108256977 dhx58 dhx58 ENSIPUP00000030132 ENSIPUP00000030132 med1 med1 acod1 acod1 LOC108274970 LOC108274970 LOC108267461 LOC108267461 LOC108256689 LOC108256689 LOC108256692 LOC108256692 LOC108256693 LOC108256693 LOC108256150 LOC108256150 LOC108256466 LOC108256466 CXorf21 CXorf21 ikbke ikbke znfx1 znfx1 LOC108279108 LOC108279108 LOC108261162 LOC108261162 ENSIPUP00000000585 ENSIPUP00000000585 LOC108273140 LOC108273140 ENSIPUP00000000681 ENSIPUP00000000681 ENSIPUP00000000825 ENSIPUP00000000825 xrcc6 xrcc6 akirin1 akirin1 LOC101154666 LOC101154666 riok3 riok3 nmi nmi LOC108263800 LOC108263800 LOC100305014 LOC100305014
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pum1Pumilio homolog 1 isoform X1. (1159 aa)
ENSIPUP00000004727annotation not available (151 aa)
LOC108270447SAM and SH3 domain-containing protein 1-like isoform X1. (1027 aa)
gsdmeNon-syndromic hearing impairment protein 5. (484 aa)
ube2kUbiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
polr3dDNA-directed RNA polymerase III subunit RPC4 isoform X1. (392 aa)
trim62E3 ubiquitin-protein ligase TRIM62 isoform X2. (477 aa)
tbk1Serine/threonine-protein kinase TBK1 isoform X1. (727 aa)
sash1SAM and SH3 domain-containing protein 1 isoform X2. (1171 aa)
LOC108269845Akirin-2-like. (181 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (726 aa)
LOC108264585Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide. (186 aa)
supt5hTranscription elongation factor SPT5. (1084 aa)
LOC108273952Multimerin-2-like isoform X1. (838 aa)
LOC108261378Zinc finger CCHC domain-containing protein 3-like. (439 aa)
ENSIPUP00000011491CD226 molecule. (326 aa)
LOC108257733EMILIN-1-like. (1027 aa)
LOC108257559interleukin-17F-like. (159 aa)
pqbp1Polyglutamine-binding protein 1 isoform X1. (241 aa)
LOC108272457Free fatty acid receptor 2-like; Belongs to the G-protein coupled receptor 1 family. (310 aa)
ENSIPUP00000013199annotation not available (174 aa)
lsm14aProtein LSM14 homolog A isoform X1. (495 aa)
ifi35Interferon-induced 35 kDa protein. (371 aa)
il12bInterleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (316 aa)
tomm70Mitochondrial import receptor subunit TOM70. (573 aa)
lamp1Lysosome-associated membrane glycoprotein 1. (412 aa)
LOC108261848Caspase-6-like; Belongs to the peptidase C14A family. (165 aa)
emilin1EMILIN-1. (1056 aa)
sting1Stimulator of Interferon genes protein. (395 aa)
LOC108269793interleukin-17F-like. (155 aa)
LOC108269798interleukin-17A-like. (125 aa)
myd88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (279 aa)
ENSIPUP00000018398annotation not available (440 aa)
ENSIPUP00000018443annotation not available (456 aa)
sfpqSplicing factor, proline- and glutamine-rich isoform X2. (586 aa)
polr3fDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (314 aa)
LOC108262464Poliovirus receptor homolog. (185 aa)
LOC108277410Cell adhesion molecule 1-like isoform X3. (422 aa)
sh21aSH2 domain-containing protein 1A. (113 aa)
faddFAS-associated death domain protein. (210 aa)
wap65-2Warm temperature acclimation protein 65 KDa-2 isoform X2. (437 aa)
LOC108269388Cis-aconitate decarboxylase-like. (498 aa)
LOC108255145Akirin-2-like. (211 aa)
sh21bSh2 domain-containing protein 1b isoform X1. (138 aa)
mmrn2Multimerin-2. (1061 aa)
LOC108273898Interferon regulatory factor 3-like. (462 aa)
polr3bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1132 aa)
cd180CD180 antigen isoform X1. (664 aa)
fbxo38F-box only protein 38 isoform X1. (1095 aa)
nononon-POU domain-containing octamer-binding protein. (436 aa)
card9Caspase recruitment domain-containing protein 9. (564 aa)
rnf185E3 ubiquitin-protein ligase RNF185 isoform X1. (196 aa)
LOC108256977Cyclic GMP-AMP synthase-like. (468 aa)
dhx58Putative ATP-dependent RNA helicase DHX58. (677 aa)
ENSIPUP00000030132Poliovirus receptor-related protein 2. (250 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1778 aa)
acod1Cis-aconitate decarboxylase. (482 aa)
LOC108274970Protein LSM14 homolog A-like isoform X2. (459 aa)
LOC108267461RNA-binding protein 4.1-like. (346 aa)
LOC108256689Free fatty acid receptor 2-like. (326 aa)
LOC108256692Free fatty acid receptor 3-like. (320 aa)
LOC108256693Free fatty acid receptor 2-like isoform X1. (336 aa)
LOC108256150Free fatty acid receptor 3-like. (325 aa)
LOC108256466Free fatty acid receptor 2-like; Belongs to the G-protein coupled receptor 1 family. (315 aa)
CXorf21Uncharacterized protein CXorf21 homolog. (266 aa)
ikbkeInhibitor of nuclear factor kappa-B kinase subunit epsilon isoform X1. (722 aa)
znfx1NFX1-type zinc finger-containing protein 1. (1003 aa)
LOC108279108Cell adhesion molecule 1-like isoform X8. (381 aa)
LOC108261162Ubiquitin-conjugating enzyme E2 K-like; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
ENSIPUP00000000585annotation not available (139 aa)
LOC108273140Lymphocyte antigen 86-like. (158 aa)
ENSIPUP00000000681annotation not available (380 aa)
ENSIPUP00000000825annotation not available (191 aa)
xrcc6X-ray repair cross-complementing protein 6. (609 aa)
akirin1Akirin-1. (182 aa)
LOC101154666Matrin-3. (1087 aa)
riok3Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (504 aa)
nmiN-myc-interactor. (384 aa)
LOC108263800Caspase-6-like; Belongs to the peptidase C14A family. (306 aa)
LOC100305014DAP12 isoform X1. (116 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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