STRINGSTRING
tpr tpr nabp1 nabp1 cdca7l cdca7l topbp1 topbp1 LOC108271937 LOC108271937 LOC108277908 LOC108277908 haspin haspin orc1 orc1 prkdc prkdc xpc xpc uimc1 uimc1 donson donson babam1 babam1 nop53 nop53 plk2 plk2 atm atm msh2 msh2 casp2 casp2 pidd1 pidd1 babam2 babam2 CRADD CRADD foxn3 foxn3 brcc3 brcc3 LOC108268046 LOC108268046 znf830 znf830 ENSIPUP00000016196 ENSIPUP00000016196 LOC108280665 LOC108280665 wac wac klhl22 klhl22 cdc6 cdc6 mrnip mrnip fzr1 fzr1 LOC108273910 LOC108273910 ccnd1 ccnd1 LOC108277216 LOC108277216 rint1 rint1 CLSPN CLSPN chek2 chek2 bub1 bub1 cdk1 cdk1 ENSIPUP00000023163 ENSIPUP00000023163 rad9a rad9a chfr chfr LOC108280911 LOC108280911 ints3 ints3 rfwd3 rfwd3 ticrr ticrr spdl1 spdl1 mad2l1 mad2l1 taok3 taok3 cdk5rap3 cdk5rap3 plk3 plk3 hus1 hus1 fancd2 fancd2 LOC108257192 LOC108257192 LOC108270643 LOC108270643 taok1 taok1 tipin tipin zfyve19 zfyve19 bub1b bub1b cdca7 cdca7 ttk ttk LOC108255973 LOC108255973 zwilch zwilch dtl dtl LOC108281008 LOC108281008 brca1 brca1 znf207 znf207 rad17 rad17 LOC108257959 LOC108257959 ier3 ier3 LOC108257839 LOC108257839 mad1l1 mad1l1 rad9b rad9b aurkb aurkb blm blm mfsd11 mfsd11 zw10 zw10 LOC108278632 LOC108278632 mre11 mre11 plk1 plk1 LOC108278428 LOC108278428 chek1 chek1 bub3 bub3 LOC108255000 LOC108255000 mus81 mus81 nbn nbn abraxas1 abraxas1 eme1 eme1 LOC108269366 LOC108269366 fbxo31 fbxo31
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tprNucleoprotein TPR isoform X1. (2335 aa)
nabp1SOSS complex subunit B2. (213 aa)
cdca7lCell division cycle-associated 7-like protein. (473 aa)
topbp1DNA topoisomerase 2-binding protein 1 isoform X7. (1561 aa)
LOC108271937Crossover junction endonuclease EME1-like. (431 aa)
LOC108277908Serine/threonine-protein kinase TAO1-like. (1017 aa)
haspinSerine/threonine-protein kinase haspin isoform X1. (1112 aa)
orc1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (1030 aa)
prkdcDNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (4101 aa)
xpcDNA repair protein complementing XP-C cells isoform X1. (896 aa)
uimc1BRCA1-A complex subunit RAP80 isoform X1. (960 aa)
donsonProtein downstream neighbor of Son. (597 aa)
babam1BRISC and BRCA1-A complex member 1. (369 aa)
nop53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (513 aa)
plk2Serine/threonine-protein kinase PLK. (659 aa)
atmNon-specific serine/threonine protein kinase. (3076 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (938 aa)
casp2LOW QUALITY PROTEIN: caspase-2; Belongs to the peptidase C14A family. (439 aa)
pidd1P53-induced death domain-containing protein 1. (988 aa)
babam2BRCA1-A complex subunit BRE. (386 aa)
CRADDDeath domain-containing protein CRADD. (135 aa)
foxn3Forkhead box protein N3 isoform X1. (471 aa)
brcc3Lys-63-specific deubiquitinase BRCC36 isoform X1. (260 aa)
LOC108268046Fizzy-related protein homolog. (486 aa)
znf830Zinc finger protein 830. (333 aa)
ENSIPUP00000016196annotation not available (490 aa)
LOC108280665WW domain-containing adapter protein with coiled-coil-like isoform X1. (507 aa)
wacWW domain-containing adapter protein with coiled-coil isoform X2. (557 aa)
klhl22Kelch-like protein 22. (624 aa)
cdc6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (587 aa)
mrnipUPF0544 protein C5orf45 homolog. (380 aa)
fzr1Fizzy-related protein homolog isoform X1. (496 aa)
LOC108273910Serine/threonine-protein kinase TAO2-like isoform X2. (1277 aa)
ccnd1G1/S-specific cyclin-D1; Belongs to the cyclin family. (292 aa)
LOC108277216Serine/threonine-protein kinase PLK. (660 aa)
rint1RAD50-interacting protein 1. (793 aa)
CLSPNClaspin. (857 aa)
chek2Serine/threonine-protein kinase Chk2. (539 aa)
bub1Mitotic checkpoint serine/threonine-protein kinase BUB1 isoform X1. (88 aa)
cdk1Cyclin-dependent kinase 1 isoform X1; Belongs to the protein kinase superfamily. (302 aa)
ENSIPUP00000023163annotation not available (190 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (384 aa)
chfrE3 ubiquitin-protein ligase CHFR. (640 aa)
LOC108280911Fizzy-related protein homolog isoform X1. (495 aa)
ints3Integrator complex subunit 3 isoform X3. (1033 aa)
rfwd3E3 ubiquitin-protein ligase RFWD3. (698 aa)
ticrrTreslin. (1839 aa)
spdl1Protein Spindly; Required for the localization of dynein and dynactin to the mitotic kintochore. Dynein is believed to control the initial lateral interaction between the kinetochore and spindle microtubules and to facilitate the subsequent formation of end-on kinetochore-microtubule attachments mediated by the NDC80 complex; Belongs to the Spindly family. (579 aa)
mad2l1Mitotic Spindle assembly checkpoint protein MAD2A. (202 aa)
taok3Serine/threonine-protein kinase TAO3. (894 aa)
cdk5rap3CDK5 regulatory subunit-associated protein 3. (504 aa)
plk3Serine/threonine-protein kinase PLK. (662 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (281 aa)
fancd2Fanconi anemia group D2 protein isoform X2. (1438 aa)
LOC108257192UNC93-like protein MFSD11 isoform X1. (448 aa)
LOC108270643Serine/threonine-protein kinase TAO3-like. (506 aa)
taok1LOW QUALITY PROTEIN: serine/threonine-protein kinase TAO1. (997 aa)
tipinTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (297 aa)
zfyve19abscission/NoCut checkpoint regulator isoform X1. (444 aa)
bub1bMitotic checkpoint serine/threonine-protein kinase BUB1 beta. (426 aa)
cdca7Cell division cycle-associated protein 7. (400 aa)
ttkDual specificity protein kinase TTK isoform X1. (994 aa)
LOC108255973LOW QUALITY PROTEIN: kinetochore-associated protein 1-like. (1878 aa)
zwilchProtein zwilch homolog. (584 aa)
dtlDenticleless protein homolog isoform X1. (630 aa)
LOC108281008Histone-lysine N-methyltransferase SETMAR. (284 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1369 aa)
znf207BUB3-interacting and GLEBS motif-containing protein ZNF207 isoform X2. (395 aa)
rad17Cell cycle checkpoint protein RAD17 isoform X4. (701 aa)
LOC108257959Mitotic checkpoint serine/threonine-protein kinase BUB1 beta-like isoform X1. (667 aa)
ier3Radiation-inducible immediate-early gene IEX-1. (130 aa)
LOC108257839Nucleoprotein TPR-like isoform X1. (2346 aa)
mad1l1Mitotic spindle assembly checkpoint protein MAD1. (715 aa)
rad9bCell cycle checkpoint control protein RAD9B isoform X1. (412 aa)
aurkbSerine/threonine-protein kinase 12; Belongs to the protein kinase superfamily. (322 aa)
blmBloom syndrome protein isoform X1. (1132 aa)
mfsd11UNC93-like protein MFSD11. (453 aa)
zw10Centromere/kinetochore protein zw10 homolog. (768 aa)
LOC108278632BUB3-interacting and GLEBS motif-containing protein ZNF207-like isoform X1. (468 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (698 aa)
plk1Serine/threonine-protein kinase PLK. (591 aa)
LOC108278428Serine/threonine-protein kinase TAO2-like isoform X1. (1168 aa)
chek1Serine/threonine-protein kinase Chk1; Belongs to the protein kinase superfamily. (466 aa)
bub3Mitotic checkpoint protein BUB3 isoform X1. (326 aa)
LOC108255000SOSS complex subunit B1-A-like. (192 aa)
mus81Crossover junction endonuclease MUS81. (627 aa)
nbnNibrin. (831 aa)
abraxas1BRCA1-A complex subunit Abraxas. (393 aa)
eme1Crossover junction endonuclease EME1. (516 aa)
LOC108269366G2 and S phase-expressed protein 1-like. (777 aa)
fbxo31F-box only protein 31. (344 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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