STRINGSTRING
blm blm mfsd11 mfsd11 mre11 mre11 LOC108278428 LOC108278428 ier3 ier3 chek1 chek1 nbn nbn abraxas1 abraxas1 topbp1 topbp1 LOC108277908 LOC108277908 uimc1 uimc1 donson donson babam1 babam1 nop53 nop53 atm atm babam2 babam2 foxn3 foxn3 brcc3 brcc3 LOC108268046 LOC108268046 ENSIPUP00000016196 ENSIPUP00000016196 mrnip mrnip fzr1 fzr1 LOC108273910 LOC108273910 rint1 rint1 CLSPN CLSPN cdk1 cdk1 LOC108280911 LOC108280911 ticrr ticrr taok3 taok3 brca1 brca1 cdk5rap3 cdk5rap3 LOC108257192 LOC108257192 LOC108270643 LOC108270643 taok1 taok1 dtl dtl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
blmBloom syndrome protein isoform X1. (1132 aa)
mfsd11UNC93-like protein MFSD11. (453 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (698 aa)
LOC108278428Serine/threonine-protein kinase TAO2-like isoform X1. (1168 aa)
ier3Radiation-inducible immediate-early gene IEX-1. (130 aa)
chek1Serine/threonine-protein kinase Chk1; Belongs to the protein kinase superfamily. (466 aa)
nbnNibrin. (831 aa)
abraxas1BRCA1-A complex subunit Abraxas. (393 aa)
topbp1DNA topoisomerase 2-binding protein 1 isoform X7. (1561 aa)
LOC108277908Serine/threonine-protein kinase TAO1-like. (1017 aa)
uimc1BRCA1-A complex subunit RAP80 isoform X1. (960 aa)
donsonProtein downstream neighbor of Son. (597 aa)
babam1BRISC and BRCA1-A complex member 1. (369 aa)
nop53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (513 aa)
atmNon-specific serine/threonine protein kinase. (3076 aa)
babam2BRCA1-A complex subunit BRE. (386 aa)
foxn3Forkhead box protein N3 isoform X1. (471 aa)
brcc3Lys-63-specific deubiquitinase BRCC36 isoform X1. (260 aa)
LOC108268046Fizzy-related protein homolog. (486 aa)
ENSIPUP00000016196annotation not available (490 aa)
mrnipUPF0544 protein C5orf45 homolog. (380 aa)
fzr1Fizzy-related protein homolog isoform X1. (496 aa)
LOC108273910Serine/threonine-protein kinase TAO2-like isoform X2. (1277 aa)
rint1RAD50-interacting protein 1. (793 aa)
CLSPNClaspin. (857 aa)
cdk1Cyclin-dependent kinase 1 isoform X1; Belongs to the protein kinase superfamily. (302 aa)
LOC108280911Fizzy-related protein homolog isoform X1. (495 aa)
ticrrTreslin. (1839 aa)
taok3Serine/threonine-protein kinase TAO3. (894 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1369 aa)
cdk5rap3CDK5 regulatory subunit-associated protein 3. (504 aa)
LOC108257192UNC93-like protein MFSD11 isoform X1. (448 aa)
LOC108270643Serine/threonine-protein kinase TAO3-like. (506 aa)
taok1LOW QUALITY PROTEIN: serine/threonine-protein kinase TAO1. (997 aa)
dtlDenticleless protein homolog isoform X1. (630 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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