STRINGSTRING
LOC108266812 LOC108266812 sdcb1 sdcb1 ccn2 ccn2 foxn3 foxn3 pxk pxk m1i1b m1i1b LOC108268998 LOC108268998 LOC108275742 LOC108275742 arl6ip5 arl6ip5 ENSIPUP00000001406 ENSIPUP00000001406 coil coil atxn1 atxn1 ercc4 ercc4 paxip1 paxip1 fbln5 fbln5 LOC108272177 LOC108272177 LOC108264858 LOC108264858 pex6 pex6 numa1 numa1 polr2a polr2a bcam bcam ENSIPUP00000004727 ENSIPUP00000004727 LOC108270447 LOC108270447 synj2bp synj2bp vta1 vta1 ift52 ift52 LOC108278318 LOC108278318 fn1 fn1 LOC108280570 LOC108280570 mdc1 mdc1 sash1 sash1 LOC108276414 LOC108276414 ift46 ift46 xrcc5 xrcc5 sae1 sae1 LOC108260308 LOC108260308 ercc2 ercc2 tax1bp3 tax1bp3 hesx1 hesx1 shank3 shank3 sdc1 sdc1 ercc6 ercc6 msh2 msh2 cep120 cep120 patj patj LOC108270689 LOC108270689 sp1 sp1 yeats4 yeats4 LOC108258529 LOC108258529 ENSIPUP00000036166 ENSIPUP00000036166 LOC108259086 LOC108259086 pex12 pex12 LOC108255275 LOC108255275 phb phb LOC108268521 LOC108268521 LOC108260234 LOC108260234 ENSIPUP00000013129 ENSIPUP00000013129 ecm1 ecm1 shank1 shank1 snf8 snf8 xrcc6 xrcc6 pick1 pick1 LOC108273944 LOC108273944 cited1 cited1 LOC108260060 LOC108260060 LOC108272975 LOC108272975 pex1 pex1 LOC108268529 LOC108268529 vgll3 vgll3 LOC108260685 LOC108260685 lmo7 lmo7 ENSIPUP00000032942 ENSIPUP00000032942 hspg2 hspg2 neil1 neil1 plekhb1 plekhb1 pex10 pex10 map2k7 map2k7 vgll2 vgll2 top2a top2a LOC108279923 LOC108279923 pdzd11 pdzd11 xrcc4 xrcc4 sirt1 sirt1 prdx3 prdx3 taf13 taf13 crocc crocc pex26 pex26 mki67 mki67 mad2l1 mad2l1 id1 id1 sdcbp sdcbp praf3 praf3 LOC108262842 LOC108262842 atxn2 atxn2 tnfaip3 tnfaip3 grip1 grip1 LOC108280347 LOC108280347 rad51 rad51 usp7 usp7 LOC108275782 LOC108275782 ciita ciita lig4 lig4 LOC108270816 LOC108270816 LOC108265196 LOC108265196 efhc1 efhc1 brca2 brca2 ercc1 ercc1 pex16 pex16 LOC108267471 LOC108267471 vps4b vps4b dab2 dab2 top2b top2b mcam mcam MPDZ MPDZ LOC108277664 LOC108277664 LOC108269513 LOC108269513
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108266812Fibronectin-like. (2483 aa)
sdcb1Syntenin-1. (298 aa)
ccn2Connective Tissue growth factor. (344 aa)
foxn3Forkhead box protein N3 isoform X1. (471 aa)
pxkPX domain-containing protein kinase-like protein isoform X1. (572 aa)
m1i1bMid1-interacting protein 1-B. (164 aa)
LOC108268998SH3 and multiple ankyrin repeat domains protein 2-like. (1745 aa)
LOC108275742G-protein-signaling modulator 2-like. (360 aa)
arl6ip5PRA1 family protein. (190 aa)
ENSIPUP00000001406annotation not available (128 aa)
coilCoilin. (659 aa)
atxn1Ataxin-1. (764 aa)
ercc4DNA repair endonuclease XPF. (899 aa)
paxip1PAX-interacting protein 1 isoform X1. (1080 aa)
fbln5Fibulin-5. (456 aa)
LOC108272177Ataxin-1-like. (823 aa)
LOC108264858SH3 and multiple ankyrin repeat domains protein 2-like isoform X2. (1725 aa)
pex6Peroxisome biogenesis factor 6. (1061 aa)
numa1Nuclear mitotic apparatus protein 1 isoform X1. (2469 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
bcamBasal cell adhesion molecule isoform X2. (597 aa)
ENSIPUP00000004727annotation not available (151 aa)
LOC108270447SAM and SH3 domain-containing protein 1-like isoform X1. (1027 aa)
synj2bpSynaptojanin-2-binding protein. (153 aa)
vta1Vacuolar protein sorting-associated protein vta1-like protein. (306 aa)
ift52Intraflagellar transport protein 52 homolog isoform X3. (436 aa)
LOC108278318Protein NPAT isoform X1. (1333 aa)
fn1Fibronectin isoform X1. (2568 aa)
LOC108280570Homer protein homolog 3-like isoform X1. (364 aa)
mdc1Mediator of DNA damage checkpoint protein 1 isoform X2. (1909 aa)
sash1SAM and SH3 domain-containing protein 1 isoform X2. (1171 aa)
LOC108276414SH3 and multiple ankyrin repeat domains protein 1-like. (260 aa)
ift46Intraflagellar transport protein 46 homolog isoform X1. (359 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (726 aa)
sae1SUMO-activating enzyme subunit 1 isoform X2. (383 aa)
LOC108260308Disabled homolog 2-like isoform X2. (602 aa)
ercc2TFIIH basal transcription factor complex helicase XPD subunit isoform X1. (761 aa)
tax1bp3Tax1-binding protein 3 isoform X1. (138 aa)
hesx1Homeobox expressed in ES cells 1 isoform X1. (159 aa)
shank3SH3 and multiple ankyrin repeat domains protein 3 isoform X1. (1895 aa)
sdc1Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (350 aa)
ercc6DNA excision repair protein ERCC-6. (1409 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (938 aa)
cep120Centrosomal protein of 120 kDa. (980 aa)
patjinaD-like protein isoform X1. (1901 aa)
LOC108270689Vacuolar protein sorting-associated protein 4B-like; Belongs to the AAA ATPase family. (435 aa)
sp1Transcription factor Sp1. (621 aa)
yeats4YEATS domain-containing protein 4. (226 aa)
LOC108258529CB1 cannabinoid receptor-interacting protein 1-like. (162 aa)
ENSIPUP00000036166annotation not available (185 aa)
LOC108259086LIM domain only protein 7-like isoform X7. (890 aa)
pex12Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family. (351 aa)
LOC108255275DNA-binding protein inhibitor ID-1-like. (127 aa)
phbProhibitin. (279 aa)
LOC108268521Vacuolar protein sorting-associated protein 4A-like; Belongs to the AAA ATPase family. (408 aa)
LOC108260234Na(+)/H(+) exchange regulatory cofactor NHE-RF3-like. (517 aa)
ENSIPUP00000013129annotation not available (130 aa)
ecm1Extracellular matrix protein 1 isoform X4. (648 aa)
shank1SH3 and multiple ankyrin repeat domains protein 1. (842 aa)
snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
xrcc6X-ray repair cross-complementing protein 6. (609 aa)
pick1PRKCA-binding protein. (408 aa)
LOC108273944Histone acetyltransferase p300-like isoform X6. (2631 aa)
cited1Cbp/p300-interacting transactivator 1 isoform X1. (155 aa)
LOC108260060Cell surface glycoprotein MUC18-like isoform X2. (617 aa)
LOC108272975Histone acetyltransferase p300-like isoform X2. (2494 aa)
pex1Peroxisome biogenesis factor 1. (1260 aa)
LOC108268529Centromere protein F-like. (1278 aa)
vgll3Transcription cofactor vestigial-like protein 3 isoform X1. (323 aa)
LOC108260685Sodium channel and clathrin linker 1-like. (674 aa)
lmo7LIM domain only protein 7 isoform X5. (1233 aa)
ENSIPUP00000032942annotation not available (115 aa)
hspg2LOW QUALITY PROTEIN: basement membrane-specific heparan sulfate proteoglycan core protein. (3282 aa)
neil1Endonuclease 8-like 1 isoform X1. (414 aa)
plekhb1Pleckstrin homology domain-containing family B member 1 isoform X2. (183 aa)
pex10Peroxisome biogenesis factor 10. (323 aa)
map2k7Dual specificity mitogen-activated protein kinase kinase 7 isoform X1. (445 aa)
vgll2Transcription cofactor vestigial-like protein 2 isoform X2. (307 aa)
top2aDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1581 aa)
LOC108279923SH3 and multiple ankyrin repeat domains protein 3-like isoform X5. (1584 aa)
pdzd11PDZ domain-containing protein 11. (142 aa)
xrcc4DNA repair protein XRCC4. (247 aa)
sirt1NAD-dependent protein deacetylase sirtuin-1 isoform X3. (731 aa)
prdx3Thioredoxin-dependent peroxide reductase, mitochondrial. (238 aa)
taf13Transcription initiation factor TFIID subunit 13. (124 aa)
croccRootletin. (322 aa)
pex26Peroxisome assembly protein 26. (333 aa)
mki67LOW QUALITY PROTEIN: antigen KI-67. (1657 aa)
mad2l1Mitotic Spindle assembly checkpoint protein MAD2A. (202 aa)
id1DNA-binding protein inhibitor ID-1. (127 aa)
sdcbpSyntenin-1. (312 aa)
praf3PRA1 family protein. (191 aa)
LOC108262842CB1 cannabinoid receptor-interacting protein 1-like isoform X1. (162 aa)
atxn2Ataxin-2 isoform X8. (1051 aa)
tnfaip3Tumor necrosis factor alpha-induced protein 3. (764 aa)
grip1Glutamate receptor-interacting protein 1 isoform X2. (1141 aa)
LOC108280347G-protein-signaling modulator 2-like isoform X1. (673 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (372 aa)
usp7Ubiquitin carboxyl-terminal hydrolase 7 isoform X1; Belongs to the peptidase C19 family. (1112 aa)
LOC108275782Ataxin-1-like. (630 aa)
ciitaMHC class II transactivator isoform X1. (1147 aa)
lig4DNA ligase. (909 aa)
LOC108270816Homer protein homolog 3-like. (358 aa)
LOC108265196LOW QUALITY PROTEIN: glutamate receptor-interacting protein 2-like. (712 aa)
efhc1EF-hand domain-containing protein 1. (557 aa)
brca2Breast cancer type 2 susceptibility protein isoform X1. (2673 aa)
ercc1DNA excision repair protein ERCC-1. (367 aa)
pex16Peroxisomal membrane protein PEX16. (339 aa)
LOC108267471Vacuolar protein sorting-associated protein 4B-like. (90 aa)
vps4bVacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (437 aa)
dab2Disabled homolog 2 isoform X1. (716 aa)
top2bDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1623 aa)
mcamCell surface glycoprotein MUC18 isoform X1. (680 aa)
MPDZMultiple PDZ domain protein isoform X7. (1683 aa)
LOC108277664Na(+)/H(+) exchange regulatory cofactor NHE-RF4-like isoform X1. (464 aa)
LOC108269513Transcription cofactor vestigial-like protein 2. (411 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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