15 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108272709	Sodium/potassium-transporting ATPase subunit alpha. (1047 aa)
	LOC108258578	Sodium/potassium-transporting ATPase subunit alpha. (975 aa)
	LOC108258576	Sodium/potassium-transporting ATPase subunit alpha. (991 aa)
	LOC108258577	Sodium/potassium-transporting ATPase subunit alpha. (992 aa)
	LOC108258574	Sodium/potassium-transporting ATPase subunit alpha. (988 aa)
	ENSIPUP00000025403	annotation not available (128 aa)
	LOC108258575	Sodium/potassium-transporting ATPase subunit alpha. (1003 aa)
	LOC108261056	Sodium/potassium-transporting ATPase subunit alpha. (1018 aa)
	LOC108270970	Apoptosis regulator BAX-like. (202 aa)
	BAX	BCL2 associated X, apoptosis regulator. (176 aa)
	bax	Apoptosis regulator BAX. (189 aa)
	LOC108274750	Apoptosis regulator BAX-like. (199 aa)
	atp4a	Sodium/potassium-transporting ATPase subunit alpha. (1028 aa)
	LOC108266346	Sodium/potassium-transporting ATPase subunit alpha. (1037 aa)
	atp1a1	Sodium/potassium-transporting ATPase subunit alpha. (1047 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAX	LOC108270970	ENSIPUP00000022885	ENSIPUP00000021392	BCL2 associated X, apoptosis regulator.	Apoptosis regulator BAX-like.	0.656
ENSIPUP00000025403	LOC108270970	ENSIPUP00000025403	ENSIPUP00000021392	annotation not available	Apoptosis regulator BAX-like.	0.639
LOC108270970	BAX	ENSIPUP00000021392	ENSIPUP00000022885	Apoptosis regulator BAX-like.	BCL2 associated X, apoptosis regulator.	0.656
LOC108270970	ENSIPUP00000025403	ENSIPUP00000021392	ENSIPUP00000025403	Apoptosis regulator BAX-like.	annotation not available	0.639
LOC108270970	LOC108274750	ENSIPUP00000021392	ENSIPUP00000025129	Apoptosis regulator BAX-like.	Apoptosis regulator BAX-like.	0.656
LOC108270970	bax	ENSIPUP00000021392	ENSIPUP00000022942	Apoptosis regulator BAX-like.	Apoptosis regulator BAX.	0.892
LOC108274750	LOC108270970	ENSIPUP00000025129	ENSIPUP00000021392	Apoptosis regulator BAX-like.	Apoptosis regulator BAX-like.	0.656
bax	LOC108270970	ENSIPUP00000022942	ENSIPUP00000021392	Apoptosis regulator BAX.	Apoptosis regulator BAX-like.	0.892