STRINGSTRING
babam1 babam1 LOC108270689 LOC108270689 LOC108269461 LOC108269461 aven aven ier3 ier3 LOC108267136 LOC108267136 rad17 rad17 LOC108268529 LOC108268529 fhl1 fhl1 brca1 brca1 dtl dtl usp47 usp47 zfyve19 zfyve19 taok1 taok1 LOC108270643 LOC108270643 LOC108257192 LOC108257192 rad51c rad51c hus1 hus1 cdk5rap3 cdk5rap3 taok3 taok3 ENSIPUP00000026397 ENSIPUP00000026397 ticrr ticrr ints3 ints3 LOC108280911 LOC108280911 pinx1 pinx1 chfr chfr cdk1 cdk1 CLSPN CLSPN rint1 rint1 LOC108257611 LOC108257611 ccnd1 ccnd1 LOC108273910 LOC108273910 fzr1 fzr1 cdc7 cdc7 mecp2 mecp2 mrnip mrnip LOC108267471 LOC108267471 cdc6 cdc6 vps4b vps4b LOC108278678 LOC108278678 ENSIPUP00000016196 ENSIPUP00000016196 znf830 znf830 LOC108268046 LOC108268046 LOC108274926 LOC108274926 brcc3 brcc3 foxn3 foxn3 babam2 babam2 LOC108268521 LOC108268521 atm atm nop53 nop53 kif14 kif14 donson donson uimc1 uimc1 cdc25b cdc25b orc1 orc1 stox1 stox1 LOC108277908 LOC108277908 topbp1 topbp1 nabp1 nabp1 miip miip abraxas1 abraxas1 nbn nbn LOC108255000 LOC108255000 chek1 chek1 LOC108278428 LOC108278428 mre11 mre11 mfsd11 mfsd11 blm blm aurkb aurkb fbxo43 fbxo43
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
babam1BRISC and BRCA1-A complex member 1. (369 aa)
LOC108270689Vacuolar protein sorting-associated protein 4B-like; Belongs to the AAA ATPase family. (435 aa)
LOC108269461Probable G-protein coupled receptor 132; Belongs to the G-protein coupled receptor 1 family. (351 aa)
avenCell death regulator Aven. (342 aa)
ier3Radiation-inducible immediate-early gene IEX-1. (130 aa)
LOC108267136G2/mitotic-specific cyclin-B3-like isoform X1; Belongs to the cyclin family. (432 aa)
rad17Cell cycle checkpoint protein RAD17 isoform X4. (701 aa)
LOC108268529Centromere protein F-like. (1278 aa)
fhl1Four and a half LIM domains protein 1 isoform X1. (318 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1369 aa)
dtlDenticleless protein homolog isoform X1. (630 aa)
usp47Ubiquitin carboxyl-terminal hydrolase 47 isoform X1; Belongs to the peptidase C19 family. (1337 aa)
zfyve19abscission/NoCut checkpoint regulator isoform X1. (444 aa)
taok1LOW QUALITY PROTEIN: serine/threonine-protein kinase TAO1. (997 aa)
LOC108270643Serine/threonine-protein kinase TAO3-like. (506 aa)
LOC108257192UNC93-like protein MFSD11 isoform X1. (448 aa)
rad51cDNA repair protein RAD51 homolog 3 isoform X1. (361 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (281 aa)
cdk5rap3CDK5 regulatory subunit-associated protein 3. (504 aa)
taok3Serine/threonine-protein kinase TAO3. (894 aa)
ENSIPUP00000026397Four and a half LIM domains 1b. (280 aa)
ticrrTreslin. (1839 aa)
ints3Integrator complex subunit 3 isoform X3. (1033 aa)
LOC108280911Fizzy-related protein homolog isoform X1. (495 aa)
pinx1PIN2/TERF1-interacting telomerase inhibitor 1 isoform X2. (399 aa)
chfrE3 ubiquitin-protein ligase CHFR. (640 aa)
cdk1Cyclin-dependent kinase 1 isoform X1; Belongs to the protein kinase superfamily. (302 aa)
CLSPNClaspin. (857 aa)
rint1RAD50-interacting protein 1. (793 aa)
LOC108257611Probable G-protein coupled receptor 132; Belongs to the G-protein coupled receptor 1 family. (360 aa)
ccnd1G1/S-specific cyclin-D1; Belongs to the cyclin family. (292 aa)
LOC108273910Serine/threonine-protein kinase TAO2-like isoform X2. (1277 aa)
fzr1Fizzy-related protein homolog isoform X1. (496 aa)
cdc7Cell division cycle 7-related protein kinase isoform X2. (522 aa)
mecp2methyl-CpG-binding protein 2 isoform X2. (533 aa)
mrnipUPF0544 protein C5orf45 homolog. (380 aa)
LOC108267471Vacuolar protein sorting-associated protein 4B-like. (90 aa)
cdc6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (587 aa)
vps4bVacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (437 aa)
LOC108278678G2/mitotic-specific cyclin-B3-like; Belongs to the cyclin family. (414 aa)
ENSIPUP00000016196annotation not available (490 aa)
znf830Zinc finger protein 830. (333 aa)
LOC108268046Fizzy-related protein homolog. (486 aa)
LOC108274926Storkhead-box protein 2-like isoform X1. (976 aa)
brcc3Lys-63-specific deubiquitinase BRCC36 isoform X1. (260 aa)
foxn3Forkhead box protein N3 isoform X1. (471 aa)
babam2BRCA1-A complex subunit BRE. (386 aa)
LOC108268521Vacuolar protein sorting-associated protein 4A-like; Belongs to the AAA ATPase family. (408 aa)
atmNon-specific serine/threonine protein kinase. (3076 aa)
nop53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (513 aa)
kif14Kinesin-like protein KIF14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1561 aa)
donsonProtein downstream neighbor of Son. (597 aa)
uimc1BRCA1-A complex subunit RAP80 isoform X1. (960 aa)
cdc25bM-phase inducer phosphatase 2. (570 aa)
orc1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (1030 aa)
stox1Storkhead-box protein 1 isoform X1. (971 aa)
LOC108277908Serine/threonine-protein kinase TAO1-like. (1017 aa)
topbp1DNA topoisomerase 2-binding protein 1 isoform X7. (1561 aa)
nabp1SOSS complex subunit B2. (213 aa)
miipMigration and invasion-inhibitory protein isoform X3. (429 aa)
abraxas1BRCA1-A complex subunit Abraxas. (393 aa)
nbnNibrin. (831 aa)
LOC108255000SOSS complex subunit B1-A-like. (192 aa)
chek1Serine/threonine-protein kinase Chk1; Belongs to the protein kinase superfamily. (466 aa)
LOC108278428Serine/threonine-protein kinase TAO2-like isoform X1. (1168 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (698 aa)
mfsd11UNC93-like protein MFSD11. (453 aa)
blmBloom syndrome protein isoform X1. (1132 aa)
aurkbSerine/threonine-protein kinase 12; Belongs to the protein kinase superfamily. (322 aa)
fbxo43F-box only protein 43 isoform X1. (597 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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