STRINGSTRING
rb1cc1 rb1cc1 wdr24 wdr24 pink1 pink1 LOC108275732 LOC108275732 epm2a epm2a foxa3 foxa3 LOC108258855 LOC108258855 ufl1 ufl1 mtdh mtdh LOC108266765 LOC108266765 rnf152 rnf152 rnf31 rnf31 sesn1 sesn1 LOC108280771 LOC108280771 LOC108280881 LOC108280881 LOC108259497 LOC108259497 LOC108265551 LOC108265551 ENSIPUP00000007669 ENSIPUP00000007669 LOC108271158 LOC108271158 LOC108275399 LOC108275399 gsk3a gsk3a sh3bp4 sh3bp4 bnip3 bnip3 pip4k2a pip4k2a tsc2 tsc2 stk11 stk11 c9orf72 c9orf72 lrsam1 lrsam1 LOC108278060 LOC108278060 LOC108260283 LOC108260283 ulk2 ulk2 flcn flcn LOC108263671 LOC108263671 LOC108256290 LOC108256290 nod1 nod1 wdr45 wdr45 LOC108280757 LOC108280757 ripk2 ripk2 snx7 snx7 LOC108263532 LOC108263532 snx4 snx4 ambra1 ambra1 ulk1 ulk1 nprl3 nprl3 prkn prkn sting1 sting1 LOC108279310 LOC108279310 prkaa2 prkaa2 htt htt LOC108270067 LOC108270067 LOC108258646 LOC108258646 fbxo7 fbxo7 trim8 trim8 tp53inp2 tp53inp2 nod2 nod2 rab3gap2 rab3gap2 LOC108269057 LOC108269057 hspb8 hspb8 bcl2l11 bcl2l11 sirt1 sirt1 nprl2 nprl2 trim32 trim32 LOC108257059 LOC108257059 gpsm1 gpsm1 vps13d vps13d LOC108255875 LOC108255875 tp53inp1 tp53inp1 bag3 bag3 LOC108269341 LOC108269341 LOC108272987 LOC108272987 becn1 becn1 svip svip LOC108261706 LOC108261706 lrrk2 lrrk2 depdc5 depdc5 dcn dcn gsk3b gsk3b tfeb tfeb snx30 snx30 sptlc1 sptlc1 LOC108265827 LOC108265827
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rb1cc1RB1-inducible coiled-coil protein 1 isoform X1. (1593 aa)
wdr24WD repeat-containing protein 24 isoform X1. (771 aa)
pink1Serine/threonine-protein kinase PINK1, mitochondrial. (564 aa)
LOC108275732FYVE and coiled-coil domain-containing protein 1-like isoform X1. (1508 aa)
epm2aLaforin. (323 aa)
foxa3Hepatocyte nuclear factor 3-gamma. (422 aa)
LOC108258855Smith-Magenis syndrome chromosomal region candidate gene 8-B protein homolog. (970 aa)
ufl1E3 UFM1-protein ligase 1. (779 aa)
mtdhProtein LYRIC isoform X6. (513 aa)
LOC108266765SH3 domain-binding protein 4-like. (960 aa)
rnf152E3 ubiquitin-protein ligase RNF152. (174 aa)
rnf31E3 ubiquitin-protein ligase RNF31. (984 aa)
sesn1Sestrin-1 isoform X1. (490 aa)
LOC108280771Uncharacterized protein LOC108280771. (868 aa)
LOC108280881Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha-like isoform X1. (442 aa)
LOC108259497Two pore calcium channel protein 1-like. (693 aa)
LOC108265551Serine/threonine-protein kinase ULK1-like isoform X2. (915 aa)
ENSIPUP00000007669annotation not available (141 aa)
LOC108271158Receptor-interacting serine/threonine-protein kinase 2-like isoform X1. (531 aa)
LOC108275399Ribonuclease ZC3H12A-like. (623 aa)
gsk3aGlycogen synthase kinase-3 alpha isoform X1; Belongs to the protein kinase superfamily. (440 aa)
sh3bp4SH3 domain-binding protein 4 isoform X1. (963 aa)
bnip3BCL2/adenovirus E1B 19 kDa protein-interacting protein 3. (197 aa)
pip4k2aPhosphatidylinositol 5-phosphate 4-kinase Type-2 alpha. (412 aa)
tsc2Tuberin isoform X1. (1831 aa)
stk11Serine/threonine-protein kinase STK11; Belongs to the protein kinase superfamily. (439 aa)
c9orf72Protein C9orf72 homolog. (462 aa)
lrsam1E3 ubiquitin-protein ligase LRSAM1 isoform X1. (726 aa)
LOC108278060Transmembrane protein 59-like isoform X1. (323 aa)
LOC108260283Non-specific serine/threonine protein kinase. (611 aa)
ulk2Serine/threonine-protein kinase ULK2 isoform X1. (1034 aa)
flcnFolliculin. (562 aa)
LOC108263671Probable E3 ubiquitin-protein ligase TRIM8. (569 aa)
LOC108256290Protein LYRIC-like. (550 aa)
nod1Nucleotide-binding oligomerization domain-containing protein 1. (946 aa)
wdr45WD repeat domain phosphoinositide-interacting protein 4. (358 aa)
LOC108280757FYVE and coiled-coil domain-containing protein 1-like isoform X1. (1329 aa)
ripk2Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. (579 aa)
snx7Sorting nexin-7 isoform X1. (463 aa)
LOC108263532Short coiled-coil protein B-like isoform X1. (119 aa)
snx4Sorting nexin-4. (453 aa)
ambra1Activating molecule in BECN1-regulated autophagy protein 1 isoform X3. (1371 aa)
ulk1Serine/threonine-protein kinase ULK1 isoform X1. (997 aa)
nprl3Nitrogen permease regulator 3-like protein isoform X2. (607 aa)
prknParkin RBR E3 ubiquitin protein ligase. (330 aa)
sting1Stimulator of Interferon genes protein. (395 aa)
LOC108279310Hamartin-like. (1195 aa)
prkaa2Non-specific serine/threonine protein kinase. (546 aa)
httHuntingtin. (3115 aa)
LOC108270067Ribonuclease ZC3H12A-like. (605 aa)
LOC108258646Glycogen synthase kinase-3 beta-like isoform X1; Belongs to the protein kinase superfamily. (422 aa)
fbxo7F-box only protein 7 isoform X1. (505 aa)
trim8Putative E3 ubiquitin-protein ligase TRIM8. (564 aa)
tp53inp2Tumor protein p53-inducible nuclear protein 2 isoform X1. (279 aa)
nod2Nucleotide-binding oligomerization domain-containing protein 2. (981 aa)
rab3gap2Rab3 GTPase-activating protein non-catalytic subunit isoform X6. (1371 aa)
LOC108269057Short coiled-coil protein B. (80 aa)
hspb8Heat shock protein beta-8; Belongs to the small heat shock protein (HSP20) family. (189 aa)
bcl2l11Bcl-2-like protein 11 isoform X2. (221 aa)
sirt1NAD-dependent protein deacetylase sirtuin-1 isoform X3. (731 aa)
nprl2Nitrogen permease regulator 2-like protein. (379 aa)
trim32E3 ubiquitin-protein ligase TRIM32. (674 aa)
LOC108257059Sestrin-2-like. (437 aa)
gpsm1G-protein-signaling modulator 1. (656 aa)
vps13dVacuolar protein sorting-associated protein 13D isoform X6. (4359 aa)
LOC108255875Hamartin-like isoform X1. (1121 aa)
tp53inp1Tumor protein p53-inducible nuclear protein 1. (242 aa)
bag3BAG family molecular chaperone regulator 3 isoform X1. (531 aa)
LOC108269341Sestrin-3-like isoform X1. (435 aa)
LOC108272987Uncharacterized protein LOC108272987. (2000 aa)
becn1Beclin-1. (448 aa)
svipSmall VCP/p97-interacting protein. (88 aa)
LOC108261706Uncharacterized protein LOC108261706. (2221 aa)
lrrk2Leucine-rich repeat serine/threonine-protein kinase 2 isoform X1. (2455 aa)
depdc5DEP domain-containing protein 5. (1496 aa)
dcnDecorin; May affect the rate of fibrils formation. (365 aa)
gsk3bGlycogen synthase kinase-3 beta isoform X2; Belongs to the protein kinase superfamily. (421 aa)
tfebTranscription factor EB isoform X1. (530 aa)
snx30Sorting nexin-30. (435 aa)
sptlc1Serine palmitoyltransferase 1. (472 aa)
LOC108265827BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like protein. (237 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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