STRINGSTRING
srebf2 srebf2 LOC108275399 LOC108275399 scarb1 scarb1 LOC108258821 LOC108258821 LOC108270067 LOC108270067 LOC108256767 LOC108256767 apob apob LOC108257904 LOC108257904 vstm2a vstm2a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
srebf2Sterol regulatory element-binding protein 2. (1141 aa)
LOC108275399Ribonuclease ZC3H12A-like. (623 aa)
scarb1Scavenger receptor class B member 1 isoform X1; Belongs to the CD36 family. (521 aa)
LOC108258821Phospholipase A(2). (140 aa)
LOC108270067Ribonuclease ZC3H12A-like. (605 aa)
LOC108256767Phospholipase A(2). (153 aa)
apobApolipoprotein B-100. (4357 aa)
LOC108257904Apolipoprotein B-100-like. (3727 aa)
vstm2aV-set and transmembrane domain-containing protein 2A. (375 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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