STRINGSTRING
ENSIPUP00000020801 ENSIPUP00000020801 snx2 snx2 rab11b rab11b stx6 stx6 LOC108270689 LOC108270689 snx30 snx30 eps15l1 eps15l1 rab35 rab35 got1a got1a arfrp1 arfrp1 snx12 snx12 tbc1d10a tbc1d10a golt1b golt1b LOC108260244 LOC108260244 ap5m1 ap5m1 chmp3 chmp3 rab10-2 rab10-2 chm2b chm2b rilp rilp pheta1 pheta1 LOC108275057 LOC108275057 LOC108271812 LOC108271812 vps50 vps50 LOC108272798 LOC108272798 cln5 cln5 LOC108254780 LOC108254780 chmp2b chmp2b vps35l vps35l LOC108276851 LOC108276851 rab6a rab6a gga3 gga3 LOC108275744 LOC108275744 rab8b rab8b rab11a rab11a trappc10 trappc10 vps16 vps16 coro1c coro1c LOC108278855 LOC108278855 als2 als2 LOC108279139 LOC108279139 snx9 snx9 arf6 arf6 LOC108274229 LOC108274229 LOC108269633 LOC108269633 itsn1 itsn1 LOC108255717 LOC108255717 tmem50a tmem50a ANKRD63 ANKRD63 LOC108280567 LOC108280567 chmp2a chmp2a gcc2 gcc2 lyst lyst rab41 rab41 dennd1b dennd1b rab15 rab15 plekhj1 plekhj1 snx8 snx8 washc4 washc4 dennd10 dennd10 tmem87b tmem87b LOC108270320 LOC108270320 rab6b-2 rab6b-2 ap5z1 ap5z1 rnf126 rnf126 atp6ap1 atp6ap1 vps51 vps51 LOC108276895 LOC108276895 heatr5a heatr5a LOC108271868 LOC108271868 LOC108260459 LOC108260459 LOC108260452 LOC108260452 LOC108268905 LOC108268905 ankrd27 ankrd27 vti1a vti1a chmp5-2 chmp5-2 grip1 grip1 tbc1d10c tbc1d10c lrrc1 lrrc1 vps26a vps26a slc66a2 slc66a2 cltc cltc micall1 micall1 LOC108259986 LOC108259986 LOC108258305 LOC108258305 rab6b rab6b vps28 vps28 vps35 vps35 LOC108280307 LOC108280307 snx33 snx33 vps25 vps25 clec16a clec16a heatr5b heatr5b rab9a rab9a LOC108269989 LOC108269989 ube2o ube2o LOC108276975 LOC108276975 arl1 arl1 rab10 rab10 vps26b vps26b pikfyve pikfyve LOC108274727 LOC108274727 bloc1s2 bloc1s2 leprot leprot LOC108265196 LOC108265196 ENSIPUP00000019800 ENSIPUP00000019800 ENSIPUP00000019729 ENSIPUP00000019729 itsn2 itsn2 vps29 vps29 LOC108260758 LOC108260758 LOC108270756 LOC108270756 LOC108265407 LOC108265407 LOC108261333 LOC108261333 LOC108267471 LOC108267471 vps4b vps4b LOC108266510 LOC108266510 LOC108280777 LOC108280777 mvb12a mvb12a LOC108266741 LOC108266741 LOC108257436 LOC108257436 SRL SRL LOC108259874 LOC108259874 gripap1 gripap1 rhobtb3 rhobtb3 tbc1d10b tbc1d10b stx16 stx16 LOC108275998 LOC108275998 ankfy1 ankfy1 tbc1d23 tbc1d23 bloc1s1 bloc1s1 bet1l bet1l LOC108258416 LOC108258416 snx4 snx4 prepl prepl snx7 snx7 LOC108261664 LOC108261664 grip2 grip2 eipr1 eipr1 snx18 snx18 LOC108263710 LOC108263710 LOC108268521 LOC108268521 vps54 vps54 washc1 washc1 LOC108256562 LOC108256562 vps26c vps26c ric1 ric1 ptpn23 ptpn23 chmp7 chmp7 vcp vcp rgp1 rgp1 LOC108273195 LOC108273195 chmp1a chmp1a LOC108276647 LOC108276647 LOC108255506 LOC108255506 hgs hgs ENSIPUP00000010755 ENSIPUP00000010755 ENSIPUP00000010706 ENSIPUP00000010706 rab7a rab7a kiaa1109 kiaa1109 LOC108280555 LOC108280555 v26bl v26bl dpy30 dpy30 rab8a rab8a chmp6 chmp6 LOC108280681 LOC108280681 tbc1d5 tbc1d5 ap5s1 ap5s1 rab25 rab25 alms1 alms1 LOC108261459 LOC108261459 reps1 reps1 trarg1 trarg1 vps53 vps53 nsg2 nsg2 scrib scrib LOC108266599 LOC108266599 washc2c washc2c vta1 vta1 LOC108258807 LOC108258807 vps52 vps52 LOC108272732 LOC108272732 chmp5 chmp5 LOC108265670 LOC108265670 LOC108277388 LOC108277388 vamp3 vamp3 vps36 vps36 stam stam ap5b1 ap5b1 snx27 snx27 chm4c chm4c rab13 rab13 stx10 stx10 LOC108278194 LOC108278194 ENSIPUP00000004358 ENSIPUP00000004358 gbf1 gbf1 LOC108268895 LOC108268895 reps2 reps2 snx3 snx3 lamtor1 lamtor1 vti1b vti1b laptm4b laptm4b ENSIPUP00000002531 ENSIPUP00000002531 eps15 eps15 ap3d1 ap3d1 ubxn6 ubxn6 arhgap1 arhgap1 LOC108274243 LOC108274243 snx6 snx6 LOC108258847 LOC108258847 ENSIPUP00000001128 ENSIPUP00000001128 snf8 snf8 ENSIPUP00000000751 ENSIPUP00000000751 vps39 vps39 LOC108270105 LOC108270105 rab11fip3 rab11fip3 LOC108268912 LOC108268912 leprotl1 leprotl1 ankrd50 ankrd50 LOC101154661 LOC101154661
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSIPUP00000020801annotation not available (85 aa)
snx2Sorting nexin-2 isoform X1. (511 aa)
rab11bRAB11B, member RAS oncogene family. (230 aa)
stx6Syntaxin-6 isoform X1; Belongs to the syntaxin family. (261 aa)
LOC108270689Vacuolar protein sorting-associated protein 4B-like; Belongs to the AAA ATPase family. (435 aa)
snx30Sorting nexin-30. (435 aa)
eps15l1Epidermal growth factor receptor substrate 15-like 1 isoform X1. (911 aa)
rab35Ras-related protein Rab-35. (201 aa)
got1aVesicle transport protein GOT1A. (132 aa)
arfrp1ADP-ribosylation factor-related protein 1; Belongs to the small GTPase superfamily. Arf family. (201 aa)
snx12Sorting nexin-12 isoform X1. (163 aa)
tbc1d10aTBC1 domain family member 10A. (393 aa)
golt1bVesicle transport protein GOT1B. (158 aa)
LOC108260244EH domain-containing protein 2-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (552 aa)
ap5m1AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (493 aa)
chmp3Charged multivesicular body protein 3. (219 aa)
rab10-2Ras-related protein Rab-10. (200 aa)
chm2bCharged multivesicular body protein 2B. (216 aa)
rilpRab-interacting lysosomal protein isoform X2. (412 aa)
pheta1Sesquipedalian-1. (252 aa)
LOC108275057Vesicle transport protein GOT1B. (202 aa)
LOC108271812Sorting nexin-6-like isoform X1. (360 aa)
vps50Syndetin isoform X4. (965 aa)
LOC108272798Rab11 family-interacting protein 4B-like isoform X1. (488 aa)
cln5Ceroid-lipofuscinosis neuronal protein 5. (350 aa)
LOC108254780Ras-related protein Rab-7a. (207 aa)
chmp2bCharged multivesicular body protein 2b. (214 aa)
vps35lUPF0505 protein C16orf62 homolog. (991 aa)
LOC108276851Sorting nexin. (557 aa)
rab6aRas-related protein Rab-6A isoform X1. (283 aa)
gga3LOW QUALITY PROTEIN: ADP-ribosylation factor-binding protein GGA3. (148 aa)
LOC108275744V-type proton ATPase subunit S1-like. (458 aa)
rab8bRas-related protein Rab-8B. (207 aa)
rab11aRAB11A, member RAS oncogene family. (225 aa)
trappc10Trafficking protein particle complex subunit 10 isoform X1. (1266 aa)
vps16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (835 aa)
coro1cCoronin; Belongs to the WD repeat coronin family. (1342 aa)
LOC108278855DENN domain-containing protein 1A-like isoform X1. (980 aa)
als2Alsin isoform X2. (1688 aa)
LOC108279139Syntaxin-5-like. (347 aa)
snx9Sorting nexin. (607 aa)
arf6ADP-ribosylation factor 6 isoform X1; Belongs to the small GTPase superfamily. Arf family. (161 aa)
LOC108274229Sesquipedalian-1-like. (276 aa)
LOC108269633Ras-related protein Rab-15-like. (204 aa)
itsn1Intersectin-1 isoform X2. (1526 aa)
LOC108255717Uncharacterized protein LOC108255717. (447 aa)
tmem50aTransmembrane protein 50A isoform X1. (191 aa)
ANKRD63Ankyrin repeat domain-containing protein 63. (364 aa)
LOC108280567Ras-related protein Rab-11B isoform X2. (218 aa)
chmp2aCharged multivesicular body protein 2A. (222 aa)
gcc2GRIP and coiled-coil domain-containing protein 2 isoform X1. (1779 aa)
lystLysosomal-trafficking regulator isoform X4. (3668 aa)
rab41Ras-related protein Rab-41 isoform X1. (211 aa)
dennd1bDENN domain-containing protein 1B. (640 aa)
rab15Ras-related protein Rab-15. (212 aa)
plekhj1Pleckstrin-like proteiny domain-containing family j member 1. (153 aa)
snx8Sorting nexin-8. (520 aa)
washc4WASH complex subunit 7. (1169 aa)
dennd10Protein FAM45A. (351 aa)
tmem87bTransmembrane protein 87B isoform X1. (563 aa)
LOC108270320EH domain-containing protein 4-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (546 aa)
rab6b-2Ras-related protein Rab-6B. (208 aa)
ap5z1AP-5 complex subunit zeta-1 isoform X1. (828 aa)
rnf126E3 ubiquitin-protein ligase RNF126. (310 aa)
atp6ap1V-type proton ATPase subunit S1 isoform X1. (468 aa)
vps51Vacuolar protein sorting-associated protein 51 homolog. (802 aa)
LOC108276895EH domain-containing protein 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
heatr5aHEAT repeat-containing protein 5A isoform X1. (2042 aa)
LOC108271868Ras-related protein Rab-7a-like. (207 aa)
LOC108260459Uncharacterized protein LOC108260459. (448 aa)
LOC108260452Uncharacterized protein LOC108260452. (406 aa)
LOC108268905Ras-related protein Rab-9B-like isoform X1. (205 aa)
ankrd27Ankyrin repeat domain-containing protein 27. (1101 aa)
vti1aVesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (217 aa)
chmp5-2Charged multivesicular body protein 5. (220 aa)
grip1Glutamate receptor-interacting protein 1 isoform X2. (1141 aa)
tbc1d10cCarabin isoform X2. (1226 aa)
lrrc1Leucine-rich repeat-containing protein 1. (572 aa)
vps26aVacuolar protein sorting-associated protein 26A. (327 aa)
slc66a2PQ-loop repeat-containing protein 1. (276 aa)
cltcClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
micall1MICAL-like protein 1 isoform X1. (901 aa)
LOC108259986Ras-related protein Rab-14. (215 aa)
LOC108258305Neuron-specific protein family member 1-like. (244 aa)
rab6bRas-related protein Rab-6B isoform X1. (208 aa)
vps28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (223 aa)
vps35Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (751 aa)
LOC108280307Zinc finger FYVE domain-containing protein 9-like isoform X1. (1183 aa)
snx33Sorting nexin. (553 aa)
vps25Vacuolar protein-sorting-associated protein 25. (174 aa)
clec16aProtein CLEC16A isoform X2. (1012 aa)
heatr5bHEAT repeat-containing protein 5B isoform X2. (2053 aa)
rab9aRas-related protein Rab-9A. (202 aa)
LOC108269989Intersectin-2-like isoform X1. (1695 aa)
ube2o(E3-independent) E2 ubiquitin-conjugating enzyme. (1303 aa)
LOC108276975Zinc finger FYVE domain-containing protein. (1420 aa)
arl1ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. (186 aa)
rab10Ras-related protein Rab-10. (201 aa)
vps26bVacuolar protein sorting-associated protein 26B. (331 aa)
pikfyve1-phosphatidylinositol 3-phosphate 5-kinase isoform X5. (2099 aa)
LOC108274727Sorting nexin-1-like isoform X1. (685 aa)
bloc1s2Biogenesis of lysosome-related organelles complex 1 subunit 2. (177 aa)
leprotLeptin receptor gene-related protein. (173 aa)
LOC108265196LOW QUALITY PROTEIN: glutamate receptor-interacting protein 2-like. (712 aa)
ENSIPUP00000019800Glutamate receptor-interacting protein 2-like. (170 aa)
ENSIPUP00000019729annotation not available (131 aa)
itsn2LOW QUALITY PROTEIN: intersectin-2. (528 aa)
vps29Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (212 aa)
LOC108260758Dynactin subunit 1-like isoform X1. (1221 aa)
LOC108270756Zinc finger FYVE domain-containing protein 9-like isoform X2. (781 aa)
LOC108265407Charged multivesicular body protein 4b. (221 aa)
LOC108261333Sarcalumenin-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (483 aa)
LOC108267471Vacuolar protein sorting-associated protein 4B-like. (90 aa)
vps4bVacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (437 aa)
LOC108266510Ankyrin repeat domain-containing protein 50-like. (1429 aa)
LOC108280777Coronin; Belongs to the WD repeat coronin family. (831 aa)
mvb12aMultivesicular body subunit 12A. (273 aa)
LOC108266741Alsin-like isoform X1. (1704 aa)
LOC108257436Tyrosine-protein phosphatase non-receptor type 23-like isoform X1. (1212 aa)
SRLSarcalumenin-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (456 aa)
LOC108259874Ras-related protein Rab-35. (205 aa)
gripap1GRIP1-associated protein 1 isoform X1. (870 aa)
rhobtb3Rho-related BTB domain-containing protein 3 isoform X2. (626 aa)
tbc1d10bTBC1 domain family member 10B. (899 aa)
stx16Syntaxin-16 isoform X2; Belongs to the syntaxin family. (319 aa)
LOC108275998Sesquipedalian-1-like isoform X2. (274 aa)
ankfy1Rabankyrin-5. (1171 aa)
tbc1d23TBC1 domain family member 23 isoform X1. (696 aa)
bloc1s1Biogenesis of lysosome-related organelles complex 1 subunit 1. (160 aa)
bet1lBET1-like protein. (110 aa)
LOC108258416DENN domain-containing protein 1B-like. (344 aa)
snx4Sorting nexin-4. (453 aa)
preplProlyl endopeptidase-like. (707 aa)
snx7Sorting nexin-7 isoform X1. (463 aa)
LOC108261664TBC1 domain family member 10A-like isoform X1. (351 aa)
grip2Glutamate receptor-interacting protein 2 isoform X2. (1090 aa)
eipr1Protein TSSC1. (387 aa)
snx18Sorting nexin. (573 aa)
LOC108263710Dynactin subunit 1-like isoform X1. (1266 aa)
LOC108268521Vacuolar protein sorting-associated protein 4A-like; Belongs to the AAA ATPase family. (408 aa)
vps54Vacuolar protein sorting-associated protein 54. (984 aa)
washc1WAS protein family homolog 1 isoform X1. (479 aa)
LOC108256562CKLF-like MARVEL transmembrane domain-containing protein 6. (189 aa)
vps26cDown syndrome critical region protein 3-like protein. (297 aa)
ric1RAB6A-GEF complex partner protein 1 isoform X1. (1426 aa)
ptpn23Tyrosine-protein phosphatase non-receptor type 23 isoform X3. (1959 aa)
chmp7Charged multivesicular body protein 7. (443 aa)
vcpTransitional Endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (806 aa)
rgp1RAB6A-GEF complex partner protein 2. (386 aa)
LOC108273195Sorting nexin-27-like. (557 aa)
chmp1aCharged multivesicular body protein 1A. (198 aa)
LOC108276647Vacuolar protein sorting-associated protein 26B-like. (305 aa)
LOC108255506Ras-related protein Rab-14-like. (215 aa)
hgsHepatocyte growth factor-regulated tyrosine kinase substrate isoform X5. (766 aa)
ENSIPUP00000010755annotation not available (739 aa)
ENSIPUP00000010706KIAA1109 ortholog. (914 aa)
rab7aRas-related protein Rab-7a. (205 aa)
kiaa1109Uncharacterized protein KIAA1109 homolog isoform X10. (1908 aa)
LOC108280555Ras-related protein Rab-35-like isoform X2. (192 aa)
v26blVacuolar protein sorting-associated protein 26B-like. (332 aa)
dpy30Protein dpy-30 homolog. (107 aa)
rab8aRas-related protein Rab-8A. (207 aa)
chmp6Charged multivesicular body protein 6. (204 aa)
LOC108280681Epidermal growth factor receptor substrate 15-like 1 isoform X1. (880 aa)
tbc1d5TBC1 domain family member 5 isoform X1. (842 aa)
ap5s1AP-5 complex subunit sigma-1 isoform X1. (196 aa)
rab25RAB25, member RAS oncogene family. (217 aa)
alms1Alstrom syndrome protein 1 isoform X1. (1794 aa)
LOC108261459TBC1 domain family member 10A-like. (342 aa)
reps1ralBP1-associated Eps domain-containing protein 1 isoform X2. (797 aa)
trarg1Tumor suppressor candidate 5. (172 aa)
vps53Vacuolar protein sorting-associated protein 53 homolog. (831 aa)
nsg2Neuron-specific protein family member 2. (265 aa)
scribProtein scribble homolog isoform X10. (1787 aa)
LOC108266599Transmembrane protein 50B-like isoform X1. (158 aa)
washc2cWASH complex subunit FAM21C isoform X2. (1386 aa)
vta1Vacuolar protein sorting-associated protein vta1-like protein. (306 aa)
LOC108258807EH domain-containing protein 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
vps52LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 52 homolog. (665 aa)
LOC108272732Charged multivesicular body protein 4b. (222 aa)
chmp5Charged multivesicular body protein 5 isoform X1. (219 aa)
LOC108265670TBC1 domain family member 10A-like. (602 aa)
LOC108277388Charged multivesicular body protein 6-like isoform X2. (204 aa)
vamp3Vesicle-associated membrane protein 3. (105 aa)
vps36Vacuolar protein-sorting-associated protein 36. (381 aa)
stamSignal transducing adapter molecule 1. (507 aa)
ap5b1AP-5 complex subunit beta-1. (964 aa)
snx27Sorting nexin-27 isoform X1. (556 aa)
chm4cCharged multivesicular body protein 4C. (236 aa)
rab13Ras-related protein Rab-13. (201 aa)
stx10Syntaxin-10. (242 aa)
LOC108278194Transmembrane protein 87A-like isoform X1. (149 aa)
ENSIPUP00000004358Transmembrane protein 87A-like. (136 aa)
gbf1Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1. (1879 aa)
LOC108268895EH domain-containing protein 1-like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (534 aa)
reps2ralBP1-associated Eps domain-containing protein 2 isoform X3. (414 aa)
snx3Sorting nexin-3 isoform X1. (193 aa)
lamtor1Ragulator complex protein LAMTOR1. (159 aa)
vti1bVesicle transport through interaction with t-SNAREs homolog 1B. (226 aa)
laptm4bLysosomal-associated Transmembrane protein 4B. (221 aa)
ENSIPUP00000002531annotation not available (94 aa)
eps15Epidermal growth factor receptor substrate 15 isoform X1. (1028 aa)
ap3d1AP-3 complex subunit delta-1 isoform X2. (1210 aa)
ubxn6UBX domain-containing protein 6 isoform X1. (438 aa)
arhgap1Rho GTPase-activating protein 1. (434 aa)
LOC108274243Rab11 family-interacting protein 4A-like isoform X1. (596 aa)
snx6Sorting nexin; Involved in several stages of intracellular trafficking. (407 aa)
LOC108258847MICAL-like protein 2. (820 aa)
ENSIPUP00000001128annotation not available (175 aa)
snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
ENSIPUP00000000751annotation not available (110 aa)
vps39vam6/Vps39-like protein isoform X3. (876 aa)
LOC108270105Transmembrane protein 87A-like. (561 aa)
rab11fip3Rab11 family-interacting protein 3 isoform X1. (1436 aa)
LOC108268912Syntaxin-5-like; Belongs to the syntaxin family. (302 aa)
leprotl1Leptin receptor overlapping transcript-like 1. (131 aa)
ankrd50Ankyrin repeat domain-containing protein 50. (1418 aa)
LOC101154661EH domain-containing protein 2 isoform X2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (543 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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