46 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108267470	Apoptosis regulator Bcl-2-like. (204 aa)
	pick1	PRKCA-binding protein. (408 aa)
	atg14	Beclin 1-associated autophagy-related key regulator. (513 aa)
	sesn1	Sestrin-1 isoform X1. (490 aa)
	bhlha15	Class A basic helix-loop-helix protein 15. (172 aa)
	LOC108256599	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1. (561 aa)
	LOC108278642	Serine/threonine-protein kinase NIM1-like; Belongs to the protein kinase superfamily. (430 aa)
	LOC108275078	Serine/threonine-protein kinase BRSK2 isoform X4. (663 aa)
	LOC108275399	Ribonuclease ZC3H12A-like. (623 aa)
	LOC108258362	5'-AMP-activated protein kinase subunit gamma-1-like isoform X2. (327 aa)
	LOC108274928	Serine/threonine-protein kinase BRSK1-like. (736 aa)
	nuak1	NUAK family SNF1-like kinase 1 isoform X1. (608 aa)
	eif2ak3	Eukaryotic translation initiation factor 2-alpha kinase 3 isoform X1. (1075 aa)
	LOC108270655	Serine/threonine-protein kinase NIM1-like; Belongs to the protein kinase superfamily. (441 aa)
	pik3c3	Phosphatidylinositol 3-kinase catalytic subunit type 3. (918 aa)
	LOC108260283	Non-specific serine/threonine protein kinase. (611 aa)
	LOC108266559	Serine/threonine-protein kinase SIK2-like. (822 aa)
	LOC108275338	Cytoplasmic polyadenylation element-binding protein 4-like isoform X1. (730 aa)
	LOC108266105	5'-AMP-activated protein kinase subunit gamma-1-like isoform X3. (336 aa)
	LOC108277697	Serine/threonine-protein kinase SIK2-like. (879 aa)
	LOC108267467	5'-AMP-activated protein kinase subunit gamma-1-like isoform X3. (537 aa)
	impact	Protein IMPACT isoform X1. (323 aa)
	prkag1	5'-AMP-activated protein kinase subunit gamma-1. (349 aa)
	sik2	Serine/threonine-protein kinase SIK2 isoform X1. (854 aa)
	LOC108259674	Serine/threonine-protein kinase BRSK2-like. (669 aa)
	LOC108269341	Sestrin-3-like isoform X1. (435 aa)
	pik3r4	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1. (1381 aa)
	c19h12orf66	UPF0536 protein C12orf66 homolog isoform X1. (489 aa)
	LOC108257059	Sestrin-2-like. (437 aa)
	nfe2l2	Nuclear factor erythroid 2-related factor 2. (586 aa)
	hspa5	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family. (652 aa)
	nim1k	Serine/threonine-protein kinase NIM1; Belongs to the protein kinase superfamily. (436 aa)
	kptn	Kaptin. (438 aa)
	sirt1	NAD-dependent protein deacetylase sirtuin-1 isoform X3. (731 aa)
	tbl2	Transducin beta-like protein 2 isoform X1. (439 aa)
	xbp1	LOW QUALITY PROTEIN: X-box-binding protein 1. (362 aa)
	rrp8	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (521 aa)
	nuak2	NUAK family SNF1-like kinase 2. (607 aa)
	itfg2	Integrin-alpha FG-GAP repeat-containing protein 2 isoform X1. (443 aa)
	LOC108273514	Serine/threonine-protein kinase BRSK2-like. (678 aa)
	SZT2	Protein SZT2 isoform X10. (2339 aa)
	Szt2	Seizure threshold 2 homolog (mouse). (117 aa)
	LOC108270067	Ribonuclease ZC3H12A-like. (605 aa)
	sik1	Serine/threonine-protein kinase SIK1. (208 aa)
	prkaa2	Non-specific serine/threonine protein kinase. (546 aa)
	LOC108274635	NUAK family SNF1-like kinase 1. (630 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108256599	LOC108257059	ENSIPUP00000006802	ENSIPUP00000030062	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Sestrin-2-like.	0.467
LOC108256599	LOC108260283	ENSIPUP00000006802	ENSIPUP00000011649	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Non-specific serine/threonine protein kinase.	0.982
LOC108256599	LOC108266105	ENSIPUP00000006802	ENSIPUP00000017030	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	5'-AMP-activated protein kinase subunit gamma-1-like isoform X3.	0.911
LOC108256599	LOC108267467	ENSIPUP00000006802	ENSIPUP00000017921	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	5'-AMP-activated protein kinase subunit gamma-1-like isoform X3.	0.901
LOC108256599	LOC108269341	ENSIPUP00000006802	ENSIPUP00000032341	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Sestrin-3-like isoform X1.	0.427
LOC108256599	LOC108270655	ENSIPUP00000006802	ENSIPUP00000010889	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Serine/threonine-protein kinase NIM1-like; Belongs to the protein kinase superfamily.	0.494
LOC108256599	LOC108278642	ENSIPUP00000006802	ENSIPUP00000006932	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Serine/threonine-protein kinase NIM1-like; Belongs to the protein kinase superfamily.	0.494
LOC108256599	nim1k	ENSIPUP00000006802	ENSIPUP00000028409	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Serine/threonine-protein kinase NIM1; Belongs to the protein kinase superfamily.	0.494
LOC108256599	pik3c3	ENSIPUP00000006802	ENSIPUP00000011327	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.590
LOC108256599	pik3r4	ENSIPUP00000006802	ENSIPUP00000031207	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Phosphoinositide 3-kinase regulatory subunit 4 isoform X1.	0.562
LOC108256599	prkaa2	ENSIPUP00000006802	ENSIPUP00000019806	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Non-specific serine/threonine protein kinase.	0.983
LOC108256599	prkag1	ENSIPUP00000006802	ENSIPUP00000034770	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	5'-AMP-activated protein kinase subunit gamma-1.	0.917
LOC108256599	sesn1	ENSIPUP00000006802	ENSIPUP00000003787	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	Sestrin-1 isoform X1.	0.467
LOC108257059	LOC108256599	ENSIPUP00000030062	ENSIPUP00000006802	Sestrin-2-like.	5'-AMP-activated protein kinase subunit gamma-1-like isoform X1.	0.467
LOC108257059	LOC108258362	ENSIPUP00000030062	ENSIPUP00000009225	Sestrin-2-like.	5'-AMP-activated protein kinase subunit gamma-1-like isoform X2.	0.467
LOC108257059	LOC108260283	ENSIPUP00000030062	ENSIPUP00000011649	Sestrin-2-like.	Non-specific serine/threonine protein kinase.	0.545
LOC108257059	LOC108266105	ENSIPUP00000030062	ENSIPUP00000017030	Sestrin-2-like.	5'-AMP-activated protein kinase subunit gamma-1-like isoform X3.	0.467
LOC108257059	LOC108267467	ENSIPUP00000030062	ENSIPUP00000017921	Sestrin-2-like.	5'-AMP-activated protein kinase subunit gamma-1-like isoform X3.	0.467
LOC108257059	LOC108269341	ENSIPUP00000030062	ENSIPUP00000032341	Sestrin-2-like.	Sestrin-3-like isoform X1.	0.904
LOC108257059	SZT2	ENSIPUP00000030062	ENSIPUP00000022550	Sestrin-2-like.	Protein SZT2 isoform X10.	0.592