STRINGSTRING
rad9b rad9b rad17 rad17 LOC108273255 LOC108273255 brca1 brca1 dtl dtl LOC108260206 LOC108260206 map3k20 map3k20 cdca7 cdca7 acer2 acer2 tipin tipin taok1 taok1 casp9 casp9 LOC108270643 LOC108270643 LOC108257192 LOC108257192 fancd2 fancd2 hus1 hus1 Eif2ak4 Eif2ak4 EIF2AK4 EIF2AK4 cdk5rap3 cdk5rap3 taok3 taok3 rhno1 rhno1 foxm1 foxm1 ticrr ticrr rfwd3 rfwd3 LOC108260615 LOC108260615 dot1l dot1l LOC108280911 LOC108280911 batf batf atad5 atad5 rad9a rad9a cdk1 cdk1 atrx atrx chek2 chek2 CLSPN CLSPN rint1 rint1 atr atr LOC108278169 LOC108278169 ccnd1 ccnd1 rps6ka6 rps6ka6 LOC108273910 LOC108273910 LOC108256425 LOC108256425 LOC108280806 LOC108280806 fzr1 fzr1 prpf19 prpf19 brca2 brca2 mrnip mrnip tfap4 tfap4 LOC108272203 LOC108272203 wac wac cep63 cep63 atrip atrip LOC108280665 LOC108280665 ENSIPUP00000016196 ENSIPUP00000016196 znf830 znf830 LOC108268046 LOC108268046 brcc3 brcc3 foxn3 foxn3 CRADD CRADD babam2 babam2 pidd1 pidd1 hinfp hinfp casp2 casp2 msh2 msh2 myo6 myo6 atm atm nop53 nop53 mad2l2 mad2l2 babam1 babam1 donson donson uimc1 uimc1 rad1 rad1 xpc xpc usp10 usp10 prkdc prkdc LOC108277908 LOC108277908 LOC108271937 LOC108271937 topbp1 topbp1 cdca7l cdca7l fbxo31 fbxo31 LOC108269366 LOC108269366 ppm1d ppm1d eme1 eme1 abraxas1 abraxas1 nbn nbn mus81 mus81 e2f1 e2f1 chek1 chek1 LOC108278428 LOC108278428 mre11 mre11 mfsd11 mfsd11 blm blm ercc6 ercc6 tp53bp1 tp53bp1 ier3 ier3 LOC108269576 LOC108269576
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rad9bCell cycle checkpoint control protein RAD9B isoform X1. (412 aa)
rad17Cell cycle checkpoint protein RAD17 isoform X4. (701 aa)
LOC108273255ATPase family AAA domain-containing protein 5-like. (927 aa)
brca1Breast cancer type 1 susceptibility protein isoform X2. (1369 aa)
dtlDenticleless protein homolog isoform X1. (630 aa)
LOC108260206Non-specific serine/threonine protein kinase. (706 aa)
map3k20Mitogen-activated protein kinase kinase kinase MLT. (796 aa)
cdca7Cell division cycle-associated protein 7. (400 aa)
acer2Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (274 aa)
tipinTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (297 aa)
taok1LOW QUALITY PROTEIN: serine/threonine-protein kinase TAO1. (997 aa)
casp9Caspase-9 isoform X2; Belongs to the peptidase C14A family. (432 aa)
LOC108270643Serine/threonine-protein kinase TAO3-like. (506 aa)
LOC108257192UNC93-like protein MFSD11 isoform X1. (448 aa)
fancd2Fanconi anemia group D2 protein isoform X2. (1438 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (281 aa)
Eif2ak4Eukaryotic translation initiation factor 2 alpha kinase 4. (141 aa)
EIF2AK4eIF-2-alpha kinase GCN2 isoform X1. (1396 aa)
cdk5rap3CDK5 regulatory subunit-associated protein 3. (504 aa)
taok3Serine/threonine-protein kinase TAO3. (894 aa)
rhno1RAD9, HUS1, RAD1-interacting nuclear orphan protein 1. (293 aa)
foxm1Forkhead box protein M1. (627 aa)
ticrrTreslin. (1839 aa)
rfwd3E3 ubiquitin-protein ligase RFWD3. (698 aa)
LOC108260615Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (285 aa)
dot1lHistone-lysine N-methyltransferase, H3 lysine-79 specific. (1504 aa)
LOC108280911Fizzy-related protein homolog isoform X1. (495 aa)
batfBasic leucine zipper transcriptional factor ATF-like. (124 aa)
atad5ATPase family AAA domain-containing protein 5 isoform X1. (1798 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (384 aa)
cdk1Cyclin-dependent kinase 1 isoform X1; Belongs to the protein kinase superfamily. (302 aa)
atrxTranscriptional regulator ATRX isoform X2. (1976 aa)
chek2Serine/threonine-protein kinase Chk2. (539 aa)
CLSPNClaspin. (857 aa)
rint1RAD50-interacting protein 1. (793 aa)
atrSerine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2616 aa)
LOC108278169Histone H4 transcription factor-like isoform X1. (500 aa)
ccnd1G1/S-specific cyclin-D1; Belongs to the cyclin family. (292 aa)
rps6ka6Ribosomal protein S6 kinase. (740 aa)
LOC108273910Serine/threonine-protein kinase TAO2-like isoform X2. (1277 aa)
LOC108256425Ribosomal protein S6 kinase. (734 aa)
LOC108280806Growth arrest and DNA damage-inducible protein GADD45 alpha-like. (158 aa)
fzr1Fizzy-related protein homolog isoform X1. (496 aa)
prpf19pre-mRNA-processing factor 19. (507 aa)
brca2Breast cancer type 2 susceptibility protein isoform X1. (2673 aa)
mrnipUPF0544 protein C5orf45 homolog. (380 aa)
tfap4Transcription factor AP-4 isoform X1. (350 aa)
LOC108272203Growth arrest and DNA damage-inducible protein GADD45 alpha-like. (210 aa)
wacWW domain-containing adapter protein with coiled-coil isoform X2. (557 aa)
cep63Centrosomal protein of 63 kDa isoform X1. (707 aa)
atripATR-interacting protein. (754 aa)
LOC108280665WW domain-containing adapter protein with coiled-coil-like isoform X1. (507 aa)
ENSIPUP00000016196annotation not available (490 aa)
znf830Zinc finger protein 830. (333 aa)
LOC108268046Fizzy-related protein homolog. (486 aa)
brcc3Lys-63-specific deubiquitinase BRCC36 isoform X1. (260 aa)
foxn3Forkhead box protein N3 isoform X1. (471 aa)
CRADDDeath domain-containing protein CRADD. (135 aa)
babam2BRCA1-A complex subunit BRE. (386 aa)
pidd1P53-induced death domain-containing protein 1. (988 aa)
hinfpHistone H4 transcription factor. (487 aa)
casp2LOW QUALITY PROTEIN: caspase-2; Belongs to the peptidase C14A family. (439 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (938 aa)
myo6Unconventional myosin-VI isoform X6; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1206 aa)
atmNon-specific serine/threonine protein kinase. (3076 aa)
nop53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (513 aa)
mad2l2Mitotic Spindle assembly checkpoint protein MAD2B. (215 aa)
babam1BRISC and BRCA1-A complex member 1. (369 aa)
donsonProtein downstream neighbor of Son. (597 aa)
uimc1BRCA1-A complex subunit RAP80 isoform X1. (960 aa)
rad1Cell cycle checkpoint protein RAD1 isoform X1. (291 aa)
xpcDNA repair protein complementing XP-C cells isoform X1. (896 aa)
usp10Ubiquitin carboxyl-terminal hydrolase. (870 aa)
prkdcDNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (4101 aa)
LOC108277908Serine/threonine-protein kinase TAO1-like. (1017 aa)
LOC108271937Crossover junction endonuclease EME1-like. (431 aa)
topbp1DNA topoisomerase 2-binding protein 1 isoform X7. (1561 aa)
cdca7lCell division cycle-associated 7-like protein. (473 aa)
fbxo31F-box only protein 31. (344 aa)
LOC108269366G2 and S phase-expressed protein 1-like. (777 aa)
ppm1dProtein phosphatase 1D. (543 aa)
eme1Crossover junction endonuclease EME1. (516 aa)
abraxas1BRCA1-A complex subunit Abraxas. (393 aa)
nbnNibrin. (831 aa)
mus81Crossover junction endonuclease MUS81. (627 aa)
e2f1Transcription factor E2F1. (433 aa)
chek1Serine/threonine-protein kinase Chk1; Belongs to the protein kinase superfamily. (466 aa)
LOC108278428Serine/threonine-protein kinase TAO2-like isoform X1. (1168 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (698 aa)
mfsd11UNC93-like protein MFSD11. (453 aa)
blmBloom syndrome protein isoform X1. (1132 aa)
ercc6DNA excision repair protein ERCC-6. (1409 aa)
tp53bp1Tumor suppressor p53-binding protein 1 isoform X3. (1750 aa)
ier3Radiation-inducible immediate-early gene IEX-1. (130 aa)
LOC108269576Unconventional myosin-VI-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1248 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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