29 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nr1h4	Bile acid receptor isoform X2. (487 aa)
	riok3	Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (504 aa)
	nr1d1	Nuclear receptor subfamily 1 group D member 1 isoform X1. (672 aa)
	ppm1a	Protein phosphatase 1A isoform X2. (377 aa)
	LOC108275399	Ribonuclease ZC3H12A-like. (623 aa)
	zmynd11	LOW QUALITY PROTEIN: zinc finger MYND domain-containing protein 11. (552 aa)
	usp10	Ubiquitin carboxyl-terminal hydrolase. (870 aa)
	tnip1	TNFAIP3-interacting protein 1 isoform X7. (643 aa)
	otud7b	OTU domain-containing protein 7B isoform X1. (907 aa)
	LOC108278050	Caspase-8-like; Belongs to the peptidase C14A family. (362 aa)
	LOC108278075	Uncharacterized protein LOC108278075 isoform X2. (196 aa)
	LOC108273990	Protein phosphatase 1B-like isoform X1. (463 aa)
	LOC108272684	Histone-lysine N-methyltransferase ASH1L-like isoform X2. (2901 aa)
	ash1l	Histone-lysine N-methyltransferase ASH1L isoform X2. (1925 aa)
	ppm1b	Protein phosphatase 1B. (433 aa)
	LOC108265581	Bile acid receptor-like. (489 aa)
	nlrx1	NLR family member X1 isoform X2. (1001 aa)
	LOC108273098	Caspase-8-like isoform X1; Belongs to the peptidase C14A family. (493 aa)
	LOC100304635	Caspase 8 isoform X1; Belongs to the peptidase C14A family. (371 aa)
	tank	TRAF family member-associated NF-kappa-B activator isoform X2. (344 aa)
	LOC108270067	Ribonuclease ZC3H12A-like. (605 aa)
	tnfaip3	Tumor necrosis factor alpha-induced protein 3. (764 aa)
	LOC108258036	Protein phosphatase 1A-like isoform X2. (444 aa)
	sirt1	NAD-dependent protein deacetylase sirtuin-1 isoform X3. (731 aa)
	LOC108266930	Caspase-8-like isoform X1; Belongs to the peptidase C14A family. (525 aa)
	chuk	Inhibitor of Nuclear factor kappa-B kinase subunit alpha. (756 aa)
	LOC108275340	OTU domain-containing protein 7A-like isoform X1. (973 aa)
	LOC108277626	Protein phosphatase 1A-like. (438 aa)
	LOC108276259	Nuclear receptor subfamily 1 group D member 1-like. (585 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108270067	tank	ENSIPUP00000022356	ENSIPUP00000021601	Ribonuclease ZC3H12A-like.	TRAF family member-associated NF-kappa-B activator isoform X2.	0.566
LOC108273098	tnfaip3	ENSIPUP00000020296	ENSIPUP00000024511	Caspase-8-like isoform X1; Belongs to the peptidase C14A family.	Tumor necrosis factor alpha-induced protein 3.	0.511
LOC108273990	ppm1b	ENSIPUP00000011744	ENSIPUP00000013825	Protein phosphatase 1B-like isoform X1.	Protein phosphatase 1B.	0.901
LOC108275340	tnfaip3	ENSIPUP00000031686	ENSIPUP00000024511	OTU domain-containing protein 7A-like isoform X1.	Tumor necrosis factor alpha-induced protein 3.	0.470
LOC108275340	tnip1	ENSIPUP00000031686	ENSIPUP00000009241	OTU domain-containing protein 7A-like isoform X1.	TNFAIP3-interacting protein 1 isoform X7.	0.702
LOC108275399	tank	ENSIPUP00000008518	ENSIPUP00000021601	Ribonuclease ZC3H12A-like.	TRAF family member-associated NF-kappa-B activator isoform X2.	0.566
chuk	nlrx1	ENSIPUP00000031478	ENSIPUP00000016372	Inhibitor of Nuclear factor kappa-B kinase subunit alpha.	NLR family member X1 isoform X2.	0.598
chuk	tank	ENSIPUP00000031478	ENSIPUP00000021601	Inhibitor of Nuclear factor kappa-B kinase subunit alpha.	TRAF family member-associated NF-kappa-B activator isoform X2.	0.601
chuk	tnfaip3	ENSIPUP00000031478	ENSIPUP00000024511	Inhibitor of Nuclear factor kappa-B kinase subunit alpha.	Tumor necrosis factor alpha-induced protein 3.	0.610
nlrx1	chuk	ENSIPUP00000016372	ENSIPUP00000031478	NLR family member X1 isoform X2.	Inhibitor of Nuclear factor kappa-B kinase subunit alpha.	0.598
otud7b	tnfaip3	ENSIPUP00000009474	ENSIPUP00000024511	OTU domain-containing protein 7B isoform X1.	Tumor necrosis factor alpha-induced protein 3.	0.471
otud7b	tnip1	ENSIPUP00000009474	ENSIPUP00000009241	OTU domain-containing protein 7B isoform X1.	TNFAIP3-interacting protein 1 isoform X7.	0.702
ppm1b	LOC108273990	ENSIPUP00000013825	ENSIPUP00000011744	Protein phosphatase 1B.	Protein phosphatase 1B-like isoform X1.	0.901
tank	LOC108270067	ENSIPUP00000021601	ENSIPUP00000022356	TRAF family member-associated NF-kappa-B activator isoform X2.	Ribonuclease ZC3H12A-like.	0.566
tank	LOC108275399	ENSIPUP00000021601	ENSIPUP00000008518	TRAF family member-associated NF-kappa-B activator isoform X2.	Ribonuclease ZC3H12A-like.	0.566
tank	chuk	ENSIPUP00000021601	ENSIPUP00000031478	TRAF family member-associated NF-kappa-B activator isoform X2.	Inhibitor of Nuclear factor kappa-B kinase subunit alpha.	0.601
tnfaip3	LOC108273098	ENSIPUP00000024511	ENSIPUP00000020296	Tumor necrosis factor alpha-induced protein 3.	Caspase-8-like isoform X1; Belongs to the peptidase C14A family.	0.511
tnfaip3	LOC108275340	ENSIPUP00000024511	ENSIPUP00000031686	Tumor necrosis factor alpha-induced protein 3.	OTU domain-containing protein 7A-like isoform X1.	0.470
tnfaip3	chuk	ENSIPUP00000024511	ENSIPUP00000031478	Tumor necrosis factor alpha-induced protein 3.	Inhibitor of Nuclear factor kappa-B kinase subunit alpha.	0.610
tnfaip3	otud7b	ENSIPUP00000024511	ENSIPUP00000009474	Tumor necrosis factor alpha-induced protein 3.	OTU domain-containing protein 7B isoform X1.	0.471