STRINGSTRING
ubap1l ubap1l LOC108270689 LOC108270689 vps37d vps37d vps37a vps37a ENSIPUP00000033462 ENSIPUP00000033462 LOC108259581 LOC108259581 ts101 ts101 vps37b vps37b rnf126 rnf126 vps28 vps28 vps25 vps25 LOC108275090 LOC108275090 LOC108262788 LOC108262788 ENSIPUP00000019769 ENSIPUP00000019769 LOC108267471 LOC108267471 vps4b vps4b LOC108257436 LOC108257436 ubap1 ubap1 rnf115 rnf115 LOC108268521 LOC108268521 ptpn23 ptpn23 tsg101 tsg101 vps36 vps36 stam stam plaa plaa snf8 snf8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ubap1lUbiquitin-associated protein 1-like. (284 aa)
LOC108270689Vacuolar protein sorting-associated protein 4B-like; Belongs to the AAA ATPase family. (435 aa)
vps37dVacuolar protein sorting-associated protein 37D isoform X1. (295 aa)
vps37aVacuolar protein sorting-associated protein 37A. (385 aa)
ENSIPUP00000033462annotation not available (73 aa)
LOC108259581Uncharacterized protein LOC108259581. (357 aa)
ts101Tumor susceptibility gene 101 protein. (389 aa)
vps37bVacuolar protein sorting-associated protein 37B. (267 aa)
rnf126E3 ubiquitin-protein ligase RNF126. (310 aa)
vps28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (223 aa)
vps25Vacuolar protein-sorting-associated protein 25. (174 aa)
LOC108275090Ubiquitin-associated protein 1-like. (398 aa)
LOC108262788Vacuolar protein sorting-associated protein 37C-like. (332 aa)
ENSIPUP00000019769Zgc:114173. (263 aa)
LOC108267471Vacuolar protein sorting-associated protein 4B-like. (90 aa)
vps4bVacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (437 aa)
LOC108257436Tyrosine-protein phosphatase non-receptor type 23-like isoform X1. (1212 aa)
ubap1Ubiquitin-associated protein 1. (457 aa)
rnf115E3 ubiquitin-protein ligase RNF115. (311 aa)
LOC108268521Vacuolar protein sorting-associated protein 4A-like; Belongs to the AAA ATPase family. (408 aa)
ptpn23Tyrosine-protein phosphatase non-receptor type 23 isoform X3. (1959 aa)
tsg101Tumor susceptibility gene 101 protein isoform X1. (390 aa)
vps36Vacuolar protein-sorting-associated protein 36. (381 aa)
stamSignal transducing adapter molecule 1. (507 aa)
plaaPhospholipase A-2-activating protein. (797 aa)
snf8Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (258 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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