STRINGSTRING
hmgcr hmgcr spry1 spry1 LOC108255556 LOC108255556 dusp10 dusp10 aida aida smpd1 smpd1 nf1 nf1 LOC108264167 LOC108264167 dusp19 dusp19 bmp4 bmp4 LOC108279299 LOC108279299 gba gba paqr3 paqr3 LOC108259026 LOC108259026 spry4 spry4 sorl1 sorl1 LOC108269231 LOC108269231 LOC108278928 LOC108278928 ENSIPUP00000021843 ENSIPUP00000021843 agt agt irak3 irak3 cdk5rap3 cdk5rap3 cav3 cav3 LOC108278595 LOC108278595 LOC108276969 LOC108276969 LOC108276876 LOC108276876
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hmgcr3-hydroxy-3-methylglutaryl coenzyme A reductase. (886 aa)
spry1Protein sprouty homolog 1. (294 aa)
LOC108255556SH2B adapter protein 3-like. (346 aa)
dusp10Dual specificity protein phosphatase 10 isoform X1. (461 aa)
aidaAxin interactor, dorsalization-associated protein isoform X1. (303 aa)
smpd1Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (598 aa)
nf1Neurofibromin isoform X5. (2745 aa)
LOC108264167Bone morphogenetic protein 2-like. (420 aa)
dusp19Dual specificity protein phosphatase 19. (214 aa)
bmp4Bone morphogenetic protein 4. (402 aa)
LOC108279299Protein sprouty homolog 2-like. (283 aa)
gbaGlucosylceramidase. (531 aa)
paqr3Progestin and adipoQ receptor family member 3 isoform X1. (312 aa)
LOC108259026Protein sprouty homolog 2-like. (333 aa)
spry4Protein sprouty homolog 4. (312 aa)
sorl1Sortilin-related receptor isoform X1. (2208 aa)
LOC108269231Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
LOC1082789283-hydroxy-3-methylglutaryl coenzyme A reductase. (858 aa)
ENSIPUP00000021843Secreted frizzled-related protein 2 like. (231 aa)
agtAngiotensinogen; Belongs to the serpin family. (451 aa)
irak3Interleukin-1 receptor-associated kinase 3. (609 aa)
cdk5rap3CDK5 regulatory subunit-associated protein 3. (504 aa)
cav3Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (150 aa)
LOC108278595Uncharacterized protein LOC108278567. (879 aa)
LOC108276969Neurofibromin isoform X3. (2756 aa)
LOC108276876Progestin and adipoQ receptor family member 3-like. (308 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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