26 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hmgcr	3-hydroxy-3-methylglutaryl coenzyme A reductase. (886 aa)
	spry1	Protein sprouty homolog 1. (294 aa)
	LOC108255556	SH2B adapter protein 3-like. (346 aa)
	dusp10	Dual specificity protein phosphatase 10 isoform X1. (461 aa)
	aida	Axin interactor, dorsalization-associated protein isoform X1. (303 aa)
	smpd1	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (598 aa)
	nf1	Neurofibromin isoform X5. (2745 aa)
	LOC108264167	Bone morphogenetic protein 2-like. (420 aa)
	dusp19	Dual specificity protein phosphatase 19. (214 aa)
	bmp4	Bone morphogenetic protein 4. (402 aa)
	LOC108279299	Protein sprouty homolog 2-like. (283 aa)
	gba	Glucosylceramidase. (531 aa)
	paqr3	Progestin and adipoQ receptor family member 3 isoform X1. (312 aa)
	LOC108259026	Protein sprouty homolog 2-like. (333 aa)
	spry4	Protein sprouty homolog 4. (312 aa)
	sorl1	Sortilin-related receptor isoform X1. (2208 aa)
	LOC108269231	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
	LOC108278928	3-hydroxy-3-methylglutaryl coenzyme A reductase. (858 aa)
	ENSIPUP00000021843	Secreted frizzled-related protein 2 like. (231 aa)
	agt	Angiotensinogen; Belongs to the serpin family. (451 aa)
	irak3	Interleukin-1 receptor-associated kinase 3. (609 aa)
	cdk5rap3	CDK5 regulatory subunit-associated protein 3. (504 aa)
	cav3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (150 aa)
	LOC108278595	Uncharacterized protein LOC108278567. (879 aa)
	LOC108276969	Neurofibromin isoform X3. (2756 aa)
	LOC108276876	Progestin and adipoQ receptor family member 3-like. (308 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108259026	spry1	ENSIPUP00000013787	ENSIPUP00000000362	Protein sprouty homolog 2-like.	Protein sprouty homolog 1.	0.683
LOC108269231	cav3	ENSIPUP00000020352	ENSIPUP00000027712	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.675
LOC108276876	dusp19	ENSIPUP00000032253	ENSIPUP00000007935	Progestin and adipoQ receptor family member 3-like.	Dual specificity protein phosphatase 19.	0.524
LOC108278928	hmgcr	ENSIPUP00000021700	ENSIPUP00000027153	3-hydroxy-3-methylglutaryl coenzyme A reductase.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.901
LOC108279299	spry1	ENSIPUP00000010716	ENSIPUP00000000362	Protein sprouty homolog 2-like.	Protein sprouty homolog 1.	0.598
cav3	LOC108269231	ENSIPUP00000027712	ENSIPUP00000020352	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.675
dusp19	LOC108276876	ENSIPUP00000007935	ENSIPUP00000032253	Dual specificity protein phosphatase 19.	Progestin and adipoQ receptor family member 3-like.	0.524
dusp19	paqr3	ENSIPUP00000007935	ENSIPUP00000013713	Dual specificity protein phosphatase 19.	Progestin and adipoQ receptor family member 3 isoform X1.	0.686
gba	smpd1	ENSIPUP00000012611	ENSIPUP00000005116	Glucosylceramidase.	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	0.949
hmgcr	LOC108278928	ENSIPUP00000027153	ENSIPUP00000021700	3-hydroxy-3-methylglutaryl coenzyme A reductase.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.901
paqr3	dusp19	ENSIPUP00000013713	ENSIPUP00000007935	Progestin and adipoQ receptor family member 3 isoform X1.	Dual specificity protein phosphatase 19.	0.686
smpd1	gba	ENSIPUP00000005116	ENSIPUP00000012611	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.	Glucosylceramidase.	0.949
spry1	LOC108259026	ENSIPUP00000000362	ENSIPUP00000013787	Protein sprouty homolog 1.	Protein sprouty homolog 2-like.	0.683
spry1	LOC108279299	ENSIPUP00000000362	ENSIPUP00000010716	Protein sprouty homolog 1.	Protein sprouty homolog 2-like.	0.598
spry1	spry4	ENSIPUP00000000362	ENSIPUP00000016727	Protein sprouty homolog 1.	Protein sprouty homolog 4.	0.628
spry4	spry1	ENSIPUP00000016727	ENSIPUP00000000362	Protein sprouty homolog 4.	Protein sprouty homolog 1.	0.628