STRINGSTRING
rgcc rgcc LOC108273824 LOC108273824 LOC108260470 LOC108260470 LOC108279384 LOC108279384 vegfc vegfc nf1 nf1 LOC108269829 LOC108269829 LOC108260832 LOC108260832 atp5f1a atp5f1a LOC108260309 LOC108260309 LOC108280750 LOC108280750 LOC108273952 LOC108273952 LOC108273217 LOC108273217 vash1 vash1 LOC108274431 LOC108274431 LOC108259423 LOC108259423 jcad jcad LOC108272203 LOC108272203 LOC108270763 LOC108270763 hspb1 hspb1 mecp2 mecp2 atp5f1b atp5f1b LOC108257253 LOC108257253 LOC108280806 LOC108280806 angpt1 angpt1 LOC108280860 LOC108280860 mmrn2 mmrn2 angpt2 angpt2 LOC108255399 LOC108255399 sirt1 sirt1 LOC108276426 LOC108276426 map2k5 map2k5 nfe2l2 nfe2l2 LOC108268415 LOC108268415 LOC108276969 LOC108276969 LOC108256791 LOC108256791 LOC108272491 LOC108272491 cib1 cib1 meox2 meox2 itgb1bp1 itgb1bp1 LOC108270063 LOC108270063 LOC108257789 LOC108257789 sp1 sp1 reck reck LOC108271239 LOC108271239 fgf2 fgf2 ENSIPUP00000001215 ENSIPUP00000001215
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rgccRegulator of cell cycle RGCC. (156 aa)
LOC108273824SH3 domain-binding protein 1-like. (696 aa)
LOC108260470RNA polymerase II degradation factor 1-like isoform X1; Belongs to the PDGF/VEGF growth factor family. (581 aa)
LOC108279384Transforming growth factor beta; Belongs to the TGF-beta family. (380 aa)
vegfcVascular endothelial growth factor C isoform X1; Belongs to the PDGF/VEGF growth factor family. (399 aa)
nf1Neurofibromin isoform X5. (2745 aa)
LOC108269829ephrin-A1-like; Belongs to the ephrin family. (230 aa)
LOC108260832Fibroblast growth factor-binding protein 1-like. (201 aa)
atp5f1aATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (583 aa)
LOC108260309Heat shock protein beta-1-like; Belongs to the small heat shock protein (HSP20) family. (185 aa)
LOC108280750Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC108273952Multimerin-2-like isoform X1. (838 aa)
LOC108273217ephrin-A1-like isoform X2; Belongs to the ephrin family. (222 aa)
vash1Vasohibin-1. (378 aa)
LOC108274431Fibroblast growth factor 18-like isoform X1; Belongs to the heparin-binding growth factors family. (208 aa)
LOC108259423Platelet-derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (476 aa)
jcadJunctional protein associated with coronary artery disease. (1489 aa)
LOC108272203Growth arrest and DNA damage-inducible protein GADD45 alpha-like. (210 aa)
LOC108270763Junction plakoglobin-like isoform X1. (722 aa)
hspb1Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family. (211 aa)
mecp2methyl-CpG-binding protein 2 isoform X2. (533 aa)
atp5f1bATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (518 aa)
LOC108257253Junction plakoglobin-like. (709 aa)
LOC108280806Growth arrest and DNA damage-inducible protein GADD45 alpha-like. (158 aa)
angpt1Angiopoietin-1 isoform X1. (528 aa)
LOC108280860Junctional protein associated with coronary artery disease-like. (1958 aa)
mmrn2Multimerin-2. (1061 aa)
angpt2Angiopoietin-2 isoform X2. (483 aa)
LOC108255399Uncharacterized protein LOC108255399; Belongs to the small heat shock protein (HSP20) family. (337 aa)
sirt1NAD-dependent protein deacetylase sirtuin-1 isoform X3. (731 aa)
LOC108276426Tumor necrosis factor receptor superfamily member 5-like. (310 aa)
map2k5Dual specificity mitogen-activated protein kinase kinase 5 isoform X4; Belongs to the protein kinase superfamily. (449 aa)
nfe2l2Nuclear factor erythroid 2-related factor 2. (586 aa)
LOC108268415Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
LOC108276969Neurofibromin isoform X3. (2756 aa)
LOC108256791Homeobox protein MOX-2-like isoform X2. (294 aa)
LOC108272491Caspase recruitment domain-containing protein 10-like. (218 aa)
cib1Calcium and integrin-binding protein 1. (189 aa)
meox2Homeobox protein MOX-2. (299 aa)
itgb1bp1Integrin beta-1-binding protein 1. (198 aa)
LOC108270063Disintegrin and metalloproteinase domain-containing protein 17-like isoform X1. (838 aa)
LOC108257789Disintegrin and metalloproteinase domain-containing protein 17-like. (833 aa)
sp1Transcription factor Sp1. (621 aa)
reckReversion-inducing cysteine-rich protein with Kazal motifs. (979 aa)
LOC108271239Thromboxane A2 receptor-like isoform X1; Belongs to the G-protein coupled receptor 1 family. (374 aa)
fgf2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (151 aa)
ENSIPUP00000001215annotation not available (215 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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