STRINGSTRING
ythdc2 ythdc2 LOC108256764 LOC108256764 LOC108275399 LOC108275399 LOC108255081 LOC108255081 Eif2ak4 Eif2ak4 EIF2AK4 EIF2AK4 LOC108270067 LOC108270067 ppib ppib prkn prkn phb phb LOC108263248 LOC108263248
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ythdc2Probable ATP-dependent RNA helicase YTHDC2 isoform X2. (1450 aa)
LOC108256764TBC1 domain family member 20-like. (404 aa)
LOC108275399Ribonuclease ZC3H12A-like. (623 aa)
LOC108255081TBC1 domain family member 20-like isoform X2. (409 aa)
Eif2ak4Eukaryotic translation initiation factor 2 alpha kinase 4. (141 aa)
EIF2AK4eIF-2-alpha kinase GCN2 isoform X1. (1396 aa)
LOC108270067Ribonuclease ZC3H12A-like. (605 aa)
ppibPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)
prknParkin RBR E3 ubiquitin protein ligase. (330 aa)
phbProhibitin. (279 aa)
LOC108263248Interferon alpha-inducible protein 27-like protein 2A. (103 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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