STRINGSTRING
LOC108278889 LOC108278889 rreb1 rreb1 syap1 syap1 carm1 carm1 LOC108277762 LOC108277762 LOC108265369 LOC108265369 LOC108280554 LOC108280554 crebl2 crebl2 LOC108275399 LOC108275399 aamdc aamdc ENSIPUP00000010846 ENSIPUP00000010846 FFAR4 FFAR4 metrnl metrnl tmem64 tmem64 klf5 klf5 ENSIPUP00000021843 ENSIPUP00000021843 LOC108270067 LOC108270067 noct noct sirt6 sirt6 xbp1 xbp1 htr2a htr2a sav1 sav1 asxl2 asxl2 LOC108257974 LOC108257974 LOC108259069 LOC108259069 co-prmt co-prmt vstm2a vstm2a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108278889Krueppel-like factor 5 isoform X1. (384 aa)
rreb1Ras-responsive element-binding protein 1 isoform X1. (1677 aa)
syap1Synapse-associated protein 1 isoform X1. (355 aa)
carm1Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (587 aa)
LOC108277762Prostaglandin G/H synthase 2-like. (606 aa)
LOC108265369Chemokine-like receptor 1 isoform X1; Belongs to the G-protein coupled receptor 1 family. (397 aa)
LOC108280554Ras-responsive element-binding protein 1-like. (1656 aa)
crebl2cAMP-responsive element-binding protein-like 2. (125 aa)
LOC108275399Ribonuclease ZC3H12A-like. (623 aa)
aamdcMth938 domain-containing protein isoform X1. (179 aa)
ENSIPUP00000010846annotation not available (336 aa)
FFAR4Uncharacterized protein LOC108260699. (338 aa)
metrnlMeteorin-like protein isoform X1. (286 aa)
tmem64Transmembrane protein 64. (348 aa)
klf5Krueppel-like factor 5. (441 aa)
ENSIPUP00000021843Secreted frizzled-related protein 2 like. (231 aa)
LOC108270067Ribonuclease ZC3H12A-like. (605 aa)
noctNocturnin isoform X1. (432 aa)
sirt6NAD-dependent protein deacetylase sirtuin-6 isoform X1. (386 aa)
xbp1LOW QUALITY PROTEIN: X-box-binding protein 1. (362 aa)
htr2a5-hydroxytryptamine receptor 2A. (457 aa)
sav1Protein salvador homolog 1. (405 aa)
asxl2Putative Polycomb group protein ASXL2 isoform X2. (1183 aa)
LOC108257974Prostaglandin G/H synthase 2-like. (607 aa)
LOC108259069Krueppel-like factor 5. (473 aa)
co-prmtHistone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (463 aa)
vstm2aV-set and transmembrane domain-containing protein 2A. (375 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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