43 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nfkbid	NF-kappa-B inhibitor delta isoform X1. (519 aa)
	LOC108280771	Uncharacterized protein LOC108280771. (868 aa)
	rnf31	E3 ubiquitin-protein ligase RNF31. (984 aa)
	vtcn1	V-set domain-containing T-cell activation inhibitor 1. (274 aa)
	fyb1	FYN-binding protein isoform X1. (807 aa)
	rftn1	Raftlin isoform X1. (624 aa)
	LOC108271158	Receptor-interacting serine/threonine-protein kinase 2-like isoform X1. (531 aa)
	LOC108270342	Tyrosine-protein kinase. (538 aa)
	LOC108271407	FYN-binding protein-like. (196 aa)
	eif2b5	Translation initiation factor eIF-2B subunit epsilon. (708 aa)
	LOC108275399	Ribonuclease ZC3H12A-like. (623 aa)
	plcg2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1263 aa)
	stk11	Serine/threonine-protein kinase STK11; Belongs to the protein kinase superfamily. (439 aa)
	LOC108267889	Roquin-1-like isoform X2. (1118 aa)
	ripk2	Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains. (579 aa)
	rbck1	ranBP-type and C3HC4-type zinc finger-containing protein 1. (513 aa)
	cd276	CD276 antigen. (318 aa)
	cd247	T-cell surface glycoprotein CD3 zeta chain precursor. (153 aa)
	LOC108266157	T-cell-specific surface glycoprotein CD28-like. (207 aa)
	ENSIPUP00000018196	HERV-H LTR-associating 2a, tandem duplicate 2. (393 aa)
	nfkbiz	NF-kappa-B inhibitor zeta. (557 aa)
	themis2	Protein THEMIS2. (686 aa)
	themis	Protein THEMIS isoform X1. (667 aa)
	LOC108270067	Ribonuclease ZC3H12A-like. (605 aa)
	malt1	Mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X2. (790 aa)
	eif2b2	Translation initiation factor eIF-2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family. (355 aa)
	ENSIPUP00000023778	annotation not available (386 aa)
	ENSIPUP00000023788	annotation not available (399 aa)
	plcg1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1306 aa)
	LOC108255503	Tyrosine-protein kinase. (532 aa)
	eif2b4	Translation initiation factor eIF-2B subunit delta isoform X2; Belongs to the eIF-2B alpha/beta/delta subunits family. (532 aa)
	cenpl	Translation initiation factor eIF-2B subunit gamma. (781 aa)
	LOC108273959	Src kinase-associated phosphoprotein 1-like. (379 aa)
	ptprc	Receptor-type tyrosine-protein phosphatase C precursor. (1165 aa)
	eif2b1	Translation initiation factor eIF-2B subunit alpha; Belongs to the eIF-2B alpha/beta/delta subunits family. (302 aa)
	LOC108276736	Roquin-2-like. (1034 aa)
	tmem269	CDP-diacylglycerol--serine O-phosphatidyltransferase isoform X1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (256 aa)
	stoml2	Stomatin-like protein 2, mitochondrial. (361 aa)
	sppl3	Signal Peptide peptidase-like 3. (382 aa)
	tnfrsf21	Tumor necrosis factor receptor superfamily member 21 isoform X2. (609 aa)
	LOC108279029	Lymphocyte cytosolic protein 2-like. (494 aa)
	rc3h1	Roquin-1 isoform X1. (1102 aa)
	LOC108270956	Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like. (802 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108255503	LOC108266157	ENSIPUP00000024453	ENSIPUP00000017452	Tyrosine-protein kinase.	T-cell-specific surface glycoprotein CD28-like.	0.488
LOC108255503	LOC108270342	ENSIPUP00000024453	ENSIPUP00000008000	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC108255503	LOC108279029	ENSIPUP00000024453	ENSIPUP00000036100	Tyrosine-protein kinase.	Lymphocyte cytosolic protein 2-like.	0.603
LOC108255503	cd247	ENSIPUP00000024453	ENSIPUP00000016754	Tyrosine-protein kinase.	T-cell surface glycoprotein CD3 zeta chain precursor.	0.580
LOC108255503	fyb1	ENSIPUP00000024453	ENSIPUP00000006097	Tyrosine-protein kinase.	FYN-binding protein isoform X1.	0.456
LOC108255503	plcg1	ENSIPUP00000024453	ENSIPUP00000024034	Tyrosine-protein kinase.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	0.447
LOC108255503	plcg2	ENSIPUP00000024453	ENSIPUP00000009177	Tyrosine-protein kinase.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	0.447
LOC108255503	ptprc	ENSIPUP00000024453	ENSIPUP00000028836	Tyrosine-protein kinase.	Receptor-type tyrosine-protein phosphatase C precursor.	0.486
LOC108266157	LOC108255503	ENSIPUP00000017452	ENSIPUP00000024453	T-cell-specific surface glycoprotein CD28-like.	Tyrosine-protein kinase.	0.488
LOC108266157	LOC108270342	ENSIPUP00000017452	ENSIPUP00000008000	T-cell-specific surface glycoprotein CD28-like.	Tyrosine-protein kinase.	0.488
LOC108266157	cd247	ENSIPUP00000017452	ENSIPUP00000016754	T-cell-specific surface glycoprotein CD28-like.	T-cell surface glycoprotein CD3 zeta chain precursor.	0.539
LOC108266157	cd276	ENSIPUP00000017452	ENSIPUP00000016474	T-cell-specific surface glycoprotein CD28-like.	CD276 antigen.	0.706
LOC108266157	ptprc	ENSIPUP00000017452	ENSIPUP00000028836	T-cell-specific surface glycoprotein CD28-like.	Receptor-type tyrosine-protein phosphatase C precursor.	0.410
LOC108266157	vtcn1	ENSIPUP00000017452	ENSIPUP00000004640	T-cell-specific surface glycoprotein CD28-like.	V-set domain-containing T-cell activation inhibitor 1.	0.655
LOC108267889	LOC108276736	ENSIPUP00000013407	ENSIPUP00000031885	Roquin-1-like isoform X2.	Roquin-2-like.	0.576
LOC108270067	nfkbiz	ENSIPUP00000022356	ENSIPUP00000020043	Ribonuclease ZC3H12A-like.	NF-kappa-B inhibitor zeta.	0.427
LOC108270342	LOC108255503	ENSIPUP00000008000	ENSIPUP00000024453	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC108270342	LOC108266157	ENSIPUP00000008000	ENSIPUP00000017452	Tyrosine-protein kinase.	T-cell-specific surface glycoprotein CD28-like.	0.488
LOC108270342	LOC108279029	ENSIPUP00000008000	ENSIPUP00000036100	Tyrosine-protein kinase.	Lymphocyte cytosolic protein 2-like.	0.603
LOC108270342	cd247	ENSIPUP00000008000	ENSIPUP00000016754	Tyrosine-protein kinase.	T-cell surface glycoprotein CD3 zeta chain precursor.	0.580