54 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108274926	Storkhead-box protein 2-like isoform X1. (976 aa)
	itgb1bp1	Integrin beta-1-binding protein 1. (198 aa)
	phb	Prohibitin. (279 aa)
	LOC108256083	Protein FAM110C-like. (420 aa)
	tnfsf11	Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family. (255 aa)
	ret	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1114 aa)
	LOC108255519	C-C motif chemokine. (110 aa)
	LOC108255518	C-C motif chemokine 19-like isoform X1. (115 aa)
	tek	Angiopoietin-1 receptor. (1153 aa)
	LOC108256701	Receptor activity-modifying protein 3-like. (155 aa)
	nts	Neurotensin/neuromedin N. (157 aa)
	tnfaip8l3	Tumor necrosis factor alpha-induced protein 8-like protein 3 isoform X1. (202 aa)
	LOC108276435	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like; Belongs to the PI3/PI4-kinase family. (1099 aa)
	LOC108268609	Proheparin-binding EGF-like growth factor. (235 aa)
	c1qtnf6	Complement C1q tumor necrosis factor-related protein 6. (245 aa)
	LOC108280419	Tissue factor-like. (250 aa)
	gfral	GDNF family receptor alpha-like isoform X4. (428 aa)
	pik3cg	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform; Belongs to the PI3/PI4-kinase family. (1105 aa)
	LOC108276421	Protein FAM110B-like. (441 aa)
	cass4	Cas scaffolding protein family member 4. (778 aa)
	LOC108267851	Myocilin-like. (434 aa)
	myoc	Myocilin isoform X1. (471 aa)
	c1qbp	Complement component 1 Q subcomponent-binding protein, mitochondrial. (289 aa)
	fam110c	Protein FAM110C. (304 aa)
	c1qtnf1	Complement C1q tumor necrosis factor-related protein 1 isoform X1. (279 aa)
	LOC108259440	Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family. (203 aa)
	f3	Tissue factor. (293 aa)
	gas6	Growth arrest-specific protein 6. (651 aa)
	fam110b	Protein FAM110B. (362 aa)
	LOC108259026	Protein sprouty homolog 2-like. (333 aa)
	pik3cb	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1069 aa)
	LOC108280221	Derriere protein-like. (357 aa)
	LOC108256290	Protein LYRIC-like. (550 aa)
	LOC108266013	Protein FAM110A-like. (428 aa)
	meis3	Homeobox protein Meis3. (416 aa)
	tgfb3	Transforming growth factor beta; Belongs to the TGF-beta family. (409 aa)
	hax1	HCLS1-associated protein X-1 isoform X2. (289 aa)
	LOC100304688	Uncharacterized protein LOC100304688. (172 aa)
	ENSIPUP00000010252	Melanocortin 1 receptor. (319 aa)
	LOC108280750	Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
	stox1	Storkhead-box protein 1 isoform X1. (971 aa)
	rictor	Rapamycin-insensitive companion of mTOR isoform X2. (1568 aa)
	ENSIPUP00000007434	annotation not available (165 aa)
	LOC108273291	Insulin-like growth factor-binding protein 5. (262 aa)
	mfhas1	Malignant fibrous histiocytoma-amplified sequence 1 isoform X1. (992 aa)
	pik3cd	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1044 aa)
	LOC108275608	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1054 aa)
	pik3ca	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1069 aa)
	nox4	NADPH oxidase 4 isoform X1. (539 aa)
	LOC108279384	Transforming growth factor beta; Belongs to the TGF-beta family. (380 aa)
	bag4	BAG family molecular chaperone regulator 4 isoform X2. (350 aa)
	mtdh	Protein LYRIC isoform X6. (513 aa)
	mydgf	Myeloid-derived growth factor. (178 aa)
	hbegf	Proheparin-binding EGF-like growth factor. (229 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSIPUP00000007434	rictor	ENSIPUP00000007434	ENSIPUP00000007558	annotation not available	Rapamycin-insensitive companion of mTOR isoform X2.	0.900
ENSIPUP00000010252	LOC100304688	ENSIPUP00000010252	ENSIPUP00000010371	Melanocortin 1 receptor.	Uncharacterized protein LOC100304688.	0.439
LOC100304688	ENSIPUP00000010252	ENSIPUP00000010371	ENSIPUP00000010252	Uncharacterized protein LOC100304688.	Melanocortin 1 receptor.	0.439
LOC108259026	LOC108268609	ENSIPUP00000013787	ENSIPUP00000026561	Protein sprouty homolog 2-like.	Proheparin-binding EGF-like growth factor.	0.540
LOC108259026	hbegf	ENSIPUP00000013787	ENSIPUP00000035886	Protein sprouty homolog 2-like.	Proheparin-binding EGF-like growth factor.	0.540
LOC108259440	LOC108275608	ENSIPUP00000017460	ENSIPUP00000004902	Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.438
LOC108259440	cass4	ENSIPUP00000017460	ENSIPUP00000019875	Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.	Cas scaffolding protein family member 4.	0.476
LOC108259440	pik3ca	ENSIPUP00000017460	ENSIPUP00000004441	Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.438
LOC108259440	pik3cb	ENSIPUP00000017460	ENSIPUP00000013514	Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.438
LOC108259440	pik3cd	ENSIPUP00000017460	ENSIPUP00000005720	Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.438
LOC108259440	tek	ENSIPUP00000017460	ENSIPUP00000027346	Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.	Angiopoietin-1 receptor.	0.725
LOC108268609	LOC108259026	ENSIPUP00000026561	ENSIPUP00000013787	Proheparin-binding EGF-like growth factor.	Protein sprouty homolog 2-like.	0.540
LOC108268609	hbegf	ENSIPUP00000026561	ENSIPUP00000035886	Proheparin-binding EGF-like growth factor.	Proheparin-binding EGF-like growth factor.	0.905
LOC108275608	LOC108259440	ENSIPUP00000004902	ENSIPUP00000017460	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Platelet-derived growth factor subunit A-like isoform X1; Belongs to the PDGF/VEGF growth factor family.	0.438
LOC108275608	LOC108276435	ENSIPUP00000004902	ENSIPUP00000027040	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform-like; Belongs to the PI3/PI4-kinase family.	0.453
LOC108275608	pik3ca	ENSIPUP00000004902	ENSIPUP00000004441	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.901
LOC108275608	pik3cb	ENSIPUP00000004902	ENSIPUP00000013514	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.905
LOC108275608	pik3cd	ENSIPUP00000004902	ENSIPUP00000005720	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.905
LOC108275608	pik3cg	ENSIPUP00000004902	ENSIPUP00000022417	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform; Belongs to the PI3/PI4-kinase family.	0.453
LOC108275608	ret	ENSIPUP00000004902	ENSIPUP00000032013	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.598