STRINGSTRING
ankrd28 ankrd28 ANKRD52 ANKRD52 LOC108280385 LOC108280385 LOC108256911 LOC108256911 ENSIPUP00000008269 ENSIPUP00000008269 LOC108275399 LOC108275399 pkd2 pkd2 nkx2-5 nkx2-5 LOC108274557 LOC108274557 LOC108266622 LOC108266622 ankrd52 ankrd52 LOC108270763 LOC108270763 LOC108272774 LOC108272774 ankrd44 ankrd44 LOC108257253 LOC108257253 LOC108269231 LOC108269231 LOC108270067 LOC108270067 cav3 cav3 LOC108258849 LOC108258849 rnf207 rnf207 pln pln LOC108259202 LOC108259202
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ankrd28Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A. (1053 aa)
ANKRD52Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like. (1053 aa)
LOC108280385Sorcin-like isoform X2. (188 aa)
LOC108256911Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like isoform X1. (1093 aa)
ENSIPUP00000008269Si:ch211-270g19.5. (52 aa)
LOC108275399Ribonuclease ZC3H12A-like. (623 aa)
pkd2Polycystin-2 isoform X2. (903 aa)
nkx2-5Homeobox protein Nkx-2.5. (308 aa)
LOC108274557Potassium voltage-gated channel subfamily KQT member 1-like; Belongs to the potassium channel family. (611 aa)
LOC108266622Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (375 aa)
ankrd52Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X2. (1067 aa)
LOC108270763Junction plakoglobin-like isoform X1. (722 aa)
LOC108272774Grancalcin-like isoform X2. (238 aa)
ankrd44Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B. (978 aa)
LOC108257253Junction plakoglobin-like. (709 aa)
LOC108269231Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
LOC108270067Ribonuclease ZC3H12A-like. (605 aa)
cav3Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (150 aa)
LOC108258849Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (387 aa)
rnf207RING finger protein 207 isoform X2. (609 aa)
plnCardiac phospholamban isoform X1. (52 aa)
LOC108259202Potassium voltage-gated channel subfamily KQT member 1-like isoform X1; Belongs to the potassium channel family. (447 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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