12 items (Ictalurus punctatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bmpr2	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1058 aa)
	LOC108279384	Transforming growth factor beta; Belongs to the TGF-beta family. (380 aa)
	LOC108264167	Bone morphogenetic protein 2-like. (420 aa)
	LOC108267606	Mothers against decapentaplegic homolog. (574 aa)
	smad4	Mothers against decapentaplegic homolog. (546 aa)
	bmp4	Bone morphogenetic protein 4. (402 aa)
	LOC108260308	Disabled homolog 2-like isoform X2. (602 aa)
	LOC108280750	Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
	dab2	Disabled homolog 2 isoform X1. (716 aa)
	LOC108273360	Mothers against decapentaplegic homolog. (561 aa)
	LOC108272897	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1042 aa)
	LOC108255640	Mothers against decapentaplegic homolog. (523 aa)

Your Current Organism:

Ictalurus punctatus

NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC108255640	LOC108264167	ENSIPUP00000035179	ENSIPUP00000005898	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 2-like.	0.639
LOC108255640	LOC108272897	ENSIPUP00000035179	ENSIPUP00000032237	Mothers against decapentaplegic homolog.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.638
LOC108255640	LOC108279384	ENSIPUP00000035179	ENSIPUP00000003544	Mothers against decapentaplegic homolog.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.572
LOC108255640	LOC108280750	ENSIPUP00000035179	ENSIPUP00000009954	Mothers against decapentaplegic homolog.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.572
LOC108255640	bmp4	ENSIPUP00000035179	ENSIPUP00000008975	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 4.	0.695
LOC108255640	bmpr2	ENSIPUP00000035179	ENSIPUP00000018349	Mothers against decapentaplegic homolog.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.638
LOC108264167	LOC108255640	ENSIPUP00000005898	ENSIPUP00000035179	Bone morphogenetic protein 2-like.	Mothers against decapentaplegic homolog.	0.639
LOC108264167	LOC108267606	ENSIPUP00000005898	ENSIPUP00000006258	Bone morphogenetic protein 2-like.	Mothers against decapentaplegic homolog.	0.639
LOC108264167	LOC108272897	ENSIPUP00000005898	ENSIPUP00000032237	Bone morphogenetic protein 2-like.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.972
LOC108264167	LOC108273360	ENSIPUP00000005898	ENSIPUP00000027339	Bone morphogenetic protein 2-like.	Mothers against decapentaplegic homolog.	0.639
LOC108264167	bmpr2	ENSIPUP00000005898	ENSIPUP00000018349	Bone morphogenetic protein 2-like.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.972
LOC108264167	smad4	ENSIPUP00000005898	ENSIPUP00000007352	Bone morphogenetic protein 2-like.	Mothers against decapentaplegic homolog.	0.639
LOC108267606	LOC108264167	ENSIPUP00000006258	ENSIPUP00000005898	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 2-like.	0.639
LOC108267606	LOC108272897	ENSIPUP00000006258	ENSIPUP00000032237	Mothers against decapentaplegic homolog.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.638
LOC108267606	LOC108273360	ENSIPUP00000006258	ENSIPUP00000027339	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC108267606	LOC108279384	ENSIPUP00000006258	ENSIPUP00000003544	Mothers against decapentaplegic homolog.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.572
LOC108267606	LOC108280750	ENSIPUP00000006258	ENSIPUP00000009954	Mothers against decapentaplegic homolog.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.572
LOC108267606	bmp4	ENSIPUP00000006258	ENSIPUP00000008975	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 4.	0.639
LOC108267606	bmpr2	ENSIPUP00000006258	ENSIPUP00000018349	Mothers against decapentaplegic homolog.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.638
LOC108267606	smad4	ENSIPUP00000006258	ENSIPUP00000007352	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901