STRINGSTRING
bmp4 bmp4 loxl2 loxl2 ENSIPUP00000036008 ENSIPUP00000036008 LOC108255679 LOC108255679 LOC108272897 LOC108272897 LOC108270133 LOC108270133 LOC108268415 LOC108268415 LOC108269149 LOC108269149 LOC108255743 LOC108255743 bmpr2 bmpr2 pkdcc pkdcc LOC108274967 LOC108274967 LOC108274431 LOC108274431 LOC108276621 LOC108276621 LOC108264167 LOC108264167 tapt1 tapt1 sox6 sox6 ccn1 ccn1 mdk mdk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bmp4Bone morphogenetic protein 4. (402 aa)
loxl2Lysyl oxidase homolog 2. (741 aa)
ENSIPUP00000036008annotation not available (118 aa)
LOC108255679Lysyl oxidase homolog 2B. (766 aa)
LOC108272897Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1042 aa)
LOC108270133Extracellular tyrosine-protein kinase PKDCC-like. (464 aa)
LOC108268415Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
LOC108269149Transmembrane anterior posterior transformation protein 1 homolog isoform X1. (593 aa)
LOC108255743Bone morphogenetic protein 10-like. (472 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1058 aa)
pkdccProtein kinase domain-containing protein, cytoplasmic. (513 aa)
LOC108274967midkine-B-like. (144 aa)
LOC108274431Fibroblast growth factor 18-like isoform X1; Belongs to the heparin-binding growth factors family. (208 aa)
LOC108276621Bone morphogenetic protein 10-like isoform X1. (448 aa)
LOC108264167Bone morphogenetic protein 2-like. (420 aa)
tapt1Transmembrane anterior posterior transformation protein 1 homolog. (568 aa)
sox6Transcription factor SOX-6 isoform X7. (759 aa)
ccn1Protein CYR61. (370 aa)
mdkMidkine. (146 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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