STRINGSTRING
LOC108279384 LOC108279384 pitx3 pitx3 LOC108256764 LOC108256764 LOC108280750 LOC108280750 LOC108273567 LOC108273567 LOC108267910 LOC108267910 six3 six3 LOC108255081 LOC108255081 LOC108274309 LOC108274309 dlx3 dlx3 LOC108268046 LOC108268046 fzr1 fzr1 LOC108267442 LOC108267442 LOC108280911 LOC108280911 bfsp1 bfsp1 atf4 atf4 LOC108256440 LOC108256440 LOC108257662 LOC108257662 LOC108260559 LOC108260559 nf2 nf2 LOC108279066 LOC108279066 celf1 celf1 tdrd7 tdrd7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108279384Transforming growth factor beta; Belongs to the TGF-beta family. (380 aa)
pitx3Homeobox protein. (300 aa)
LOC108256764TBC1 domain family member 20-like. (404 aa)
LOC108280750Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC108273567Homeobox protein SIX6-like. (286 aa)
LOC108267910Homeobox protein SIX6-like. (238 aa)
six3Homeobox protein SIX3. (292 aa)
LOC108255081TBC1 domain family member 20-like isoform X2. (409 aa)
LOC108274309Homeobox protein Dlx4b-like. (256 aa)
dlx3Homeobox protein DLX-3. (264 aa)
LOC108268046Fizzy-related protein homolog. (486 aa)
fzr1Fizzy-related protein homolog isoform X1. (496 aa)
LOC108267442Ski-like protein isoform X1. (744 aa)
LOC108280911Fizzy-related protein homolog isoform X1. (495 aa)
bfsp1Filensin; Belongs to the intermediate filament family. (625 aa)
atf4Cyclic AMP-dependent transcription factor ATF-4. (421 aa)
LOC108256440Ski-like protein. (675 aa)
LOC108257662Homeobox protein SIX6. (242 aa)
LOC108260559Tudor domain-containing protein 7A-like. (980 aa)
nf2Merlin. (591 aa)
LOC108279066Merlin-like isoform X4. (595 aa)
celf1CUGBP Elav-like family member 1 isoform X2. (497 aa)
tdrd7Tudor domain-containing protein 7 isoform X2. (1100 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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