STRINGSTRING
LOC108279333 LOC108279333 LOC108278809 LOC108278809 LOC108264913 LOC108264913 rnf8 rnf8 LOC108263248 LOC108263248 ube3a ube3a kbtbd7 kbtbd7 ube2a ube2a amfr amfr ubr5 ubr5 LOC108256709 LOC108256709 LOC108271999 LOC108271999 LOC108277312 LOC108277312 ube2c ube2c rffl rffl LOC108276113 LOC108276113 LOC108265473 LOC108265473 znrf2 znrf2 ube2k ube2k rnf146 rnf146 klhl2 klhl2 rnf152 rnf152 klhl3 klhl3 nmi nmi LOC108280976 LOC108280976 LOC108255167 LOC108255167 LOC108261162 LOC108261162 marchf6 marchf6 ube2g2 ube2g2 cul1 cul1 ube2e3 ube2e3 dtx3 dtx3 cul3 cul3 LOC108261246 LOC108261246 arih2 arih2 znrf1 znrf1 LOC108263550 LOC108263550 rnf115 rnf115 LOC108255862 LOC108255862 ube2d1 ube2d1 LOC108266561 LOC108266561 rnf4 rnf4 LOC108280768 LOC108280768 LOC108280845 LOC108280845 ube2g1 ube2g1 prkn prkn ube2r2 ube2r2 LOC108272957 LOC108272957 LOC108272959 LOC108272959 LOC108272603 LOC108272603 ube2d2 ube2d2 LOC108266509 LOC108266509 LOC108278819 LOC108278819 bfar bfar LOC108259060 LOC108259060 LOC108270474 LOC108270474 ube3c ube3c hace1 hace1 ENSIPUP00000021337 ENSIPUP00000021337 ube2h ube2h LOC108267510 LOC108267510 LOC108280790 LOC108280790 LOC108277237 LOC108277237 tnfaip3 tnfaip3 LOC108276332 LOC108276332 fbxo38 fbxo38 rnf216 rnf216 rnf126 rnf126 trim32 trim32
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108279333E3 ubiquitin-protein ligase rififylin-like isoform X1. (260 aa)
LOC108278809Ubiquitin-conjugating enzyme E2 B-like isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
LOC108264913E3 ubiquitin-protein ligase RNF34-like isoform X1. (434 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (491 aa)
LOC108263248Interferon alpha-inducible protein 27-like protein 2A. (103 aa)
ube3aUbiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (853 aa)
kbtbd7Kelch repeat and BTB domain-containing protein 7. (618 aa)
ube2aUbiquitin conjugating enzyme E2 A. (122 aa)
amfrE3 ubiquitin-protein ligase AMFR. (622 aa)
ubr5E3 ubiquitin-protein ligase UBR5 isoform X4. (2425 aa)
LOC108256709Ubiquitin-conjugating enzyme E2 E2; Belongs to the ubiquitin-conjugating enzyme family. (201 aa)
LOC108271999E3 ubiquitin-protein ligase. (847 aa)
LOC108277312E3 ubiquitin-protein ligase RNF34-like isoform X1. (388 aa)
ube2cUbiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family. (172 aa)
rfflE3 ubiquitin-protein ligase rififylin isoform X1. (349 aa)
LOC108276113E3 ubiquitin-protein ligase. (863 aa)
LOC108265473Ubiquitin-conjugating enzyme E2 D4 isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
znrf2E3 ubiquitin-protein ligase ZNRF2. (197 aa)
ube2kUbiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
rnf146E3 ubiquitin-protein ligase RNF146. (409 aa)
klhl2Kelch-like protein 2 isoform X1. (607 aa)
rnf152E3 ubiquitin-protein ligase RNF152. (174 aa)
klhl3Kelch-like protein 3. (587 aa)
nmiN-myc-interactor. (384 aa)
LOC108280976E3 ubiquitin-protein ligase DTX3L-like. (328 aa)
LOC108255167E3 ubiquitin-protein ligase DTX3L-like isoform X2. (876 aa)
LOC108261162Ubiquitin-conjugating enzyme E2 K-like; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
marchf6E3 ubiquitin-protein ligase MARCH6. (914 aa)
ube2g2Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family. (165 aa)
cul1Cullin 1. (861 aa)
ube2e3Ubiquitin-conjugating enzyme E2 E3; Belongs to the ubiquitin-conjugating enzyme family. (210 aa)
dtx3Probable E3 ubiquitin-protein ligase DTX3 isoform X1. (404 aa)
cul3Cullin-3 isoform X1; Belongs to the cullin family. (773 aa)
LOC108261246Cullin-3. (670 aa)
arih2RBR-type E3 ubiquitin transferase. (501 aa)
znrf1E3 ubiquitin-protein ligase ZNRF1 isoform X2. (229 aa)
LOC108263550Ubiquitin-conjugating enzyme E2 D2-like isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
rnf115E3 ubiquitin-protein ligase RNF115. (311 aa)
LOC108255862E3 ubiquitin-protein ligase DTX3L-like. (429 aa)
ube2d1Ubiquitin conjugating enzyme E2 D1. (148 aa)
LOC108266561Ubiquitin-conjugating enzyme E2 A-like isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
rnf4E3 ubiquitin-protein ligase RNF4 isoform X2. (195 aa)
LOC108280768Cullin-1; Belongs to the cullin family. (777 aa)
LOC108280845Cullin-3-like isoform X1; Belongs to the cullin family. (258 aa)
ube2g1Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
prknParkin RBR E3 ubiquitin protein ligase. (330 aa)
ube2r2Ubiquitin-conjugating enzyme E2 R2; Belongs to the ubiquitin-conjugating enzyme family. (250 aa)
LOC108272957Ubiquitin-conjugating enzyme E2 E2-like; Belongs to the ubiquitin-conjugating enzyme family. (210 aa)
LOC108272959Ubiquitin-conjugating enzyme E2 E1; Belongs to the ubiquitin-conjugating enzyme family. (201 aa)
LOC108272603E3 ubiquitin-protein ligase DTX3L-like. (157 aa)
ube2d2Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
LOC108266509Uncharacterized protein LOC108266509. (882 aa)
LOC108278819Ubiquitin-conjugating enzyme E2 G1-like; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
bfarBifunctional apoptosis regulator. (541 aa)
LOC108259060Ubiquitin-conjugating enzyme E2 A-like isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
LOC108270474Ubiquitin-conjugating enzyme E2 D4-like; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
ube3cUbiquitin-protein ligase E3C. (1092 aa)
hace1E3 ubiquitin-protein ligase HACE1. (903 aa)
ENSIPUP00000021337annotation not available (405 aa)
ube2hUbiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
LOC108267510E3 ubiquitin-protein ligase znrf1-like isoform X1. (242 aa)
LOC108280790Ubiquitin-conjugating enzyme E2 R2-like; Belongs to the ubiquitin-conjugating enzyme family. (260 aa)
LOC108277237Ubiquitin-conjugating enzyme E2 D2-like; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
tnfaip3Tumor necrosis factor alpha-induced protein 3. (764 aa)
LOC108276332Bifunctional apoptosis regulator-like. (465 aa)
fbxo38F-box only protein 38 isoform X1. (1095 aa)
rnf216E3 ubiquitin-protein ligase RNF216 isoform X1. (901 aa)
rnf126E3 ubiquitin-protein ligase RNF126. (310 aa)
trim32E3 ubiquitin-protein ligase TRIM32. (674 aa)
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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